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ID:DATAmic13

PMGR Prokaryote 12741 8

2023-06-29

Creator: sunshuai@genomics.cn

Updater: zhanglei2@genomics.cn

Public Marine Genome Resources of Prokaryote (PMGR Prokaryote) aims to be the world's most comprehensively specialized database of Prokaryote living in the marine environment. The ocean occupies 71% of the earth's surface area, more than 25% of the global species. The ocean is the origin of life and has extremely high biodiversity. However, there has been no specialized genomic database for marine organisms. When we (BGI-Qingdao) reviewed the marine omics on our white paper, which was published every two years, the genomics resources of marine organisms were very fragmented and incomplete. This data set is maintained by BGI-Qingdao, including the newly assembled genomes by ourselves and the published genomes from other public databases. We systematically evaluated the assembly quality, annotated the genes for species that do not have genetic annotations, and performed an overview analysis in our white paper on marine resources. In short, we provided comprehensive, artificially corrected, convenient, direct, and convenient genome resources to the researchers in the field of marine biological resources.

marine organism genomes prokaryote

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Source: RefSeq Assembly ( ID GCF_009002475.1 )

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Project ID	Sample ID	Assembly accession	Organism	Molecule type	Genome representation	File

A -
Source: RefSeq Assembly ( ID GCF_009017255.1 )

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Project ID	Sample ID	Assembly accession	Organism	Molecule type	Genome representation	File

A -
Source: RefSeq Assembly ( ID GCF_009017275.1 )

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Assembly data:

Project ID	Sample ID	Assembly accession	Organism	Molecule type	Genome representation	File

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Other details

Referenced accession ID :

The dataset references GCA_000211475.1, GCA_000215915.3, GCA_000341715.1, GCA_000363885.1, GCA_000385565.1, GCA_000398765.1, GCA_000789255.1, GCA_000875775.1, GCA_000956175.1, GCA_000978935.1, GCA_000978945.1, GCA_000978955.1, GCA_000978965.1, GCA_001006045.1, GCA_001017125.1, GCA_001305655.1, GCA_001402945.1, GCA_001433455.1, GCA_001462395.1, GCA_001484195.1, GCA_001592435.1, GCA_001888095.1, GCA_002156965.1, GCA_002813655.1, GCA_002813675.1, GCA_002897655.1, GCA_002897955.1, GCA_002945325.1, GCA_002952775.1, GCA_003034855.1, GCA_003045125.1, GCA_003175215.1, GCA_003336245.1, GCA_003336485.1, GCA_003351865.1, GCA_003369835.1, GCA_003722075.1, GCA_003841485.1, GCA_003841505.1, GCA_003856835.1, GCA_004099695.1, GCA_004102725.1, GCA_004137855.1, GCA_004150395.1, GCA_004297185.1, GCA_004310395.1, GCA_004323575.1, GCA_004745425.1, GCA_004765815.2, GCA_004799685.1, GCA_005155585.1, GCA_006538205.1, GCA_007050895.1, GCA_007833275.1, GCA_008000775.1, GCA_009176545.1, GCA_009674625.1, GCA_009791395.1, GCA_009914725.1, GCA_900064395.1, GCA_900069765.1, GCA_900129775.1, GCA_900198835.1, GCA_900620265.1, GCA_900774055.1, GCA_900774285.1, GCA_902158735.1, GCA_902531675.1, GCA_902567315.1, GCA_902567485.1, GCA_902576965.1, GCA_902578795.1, GCA_902590655.1, GCA_902592435.1, GCA_902606965.1, GCA_902608175.1, GCA_902625325.1, GCA_011125455.1, GCA_902609415.1, GCA_902589825.1, GCA_002954445.1, GCA_902589265.1, GCA_010500615.1, GCA_003185655.1, GCA_902587165.1, GCA_902728225.1, GCA_902728235.1, GCA_902728245.1, GCA_902728255.1, GCA_004299845.1, GCA_900890705.1, GCA_900890425.1, GCA_001017655.1, GCA_002866025.1, GCA_011057665.1, GCA_000789335.1, GCA_000978555.1, GCA_011057685.1, GCA_900129985.1, GCA_003351105.1, GCA_001682135.1, GCA_001990485.1, GCA_011057735.1, GCA_900129175.1, GCA_004135675.1, GCA_011057715.1, GCA_003664995.1, GCA_900163975.1, GCA_900163985.1, GCA_003346715.1, GCA_902561915.1, GCA_001895085.1, GCA_001273615.1, GCA_002109495.1, GCA_003086895.1, GCA_003086775.1, GCA_003086835.1, GCA_003086675.1, GCA_003086815.1, GCA_003086875.1, GCA_002893095.1, GCA_001314305.1, GCA_900167055.1, GCA_003233695.1, GCA_004357985.1, GCA_007859325.1, GCA_001187785.1, GCA_003410055.1, GCA_010499265.1, GCA_011008905.1, GCA_003267965.1, GCA_002000055.1, GCA_009671245.1, GCA_902518775.1, GCA_902576585.1, GCA_002897635.1, GCA_003172895.1, GCA_003172875.1, GCA_005885815.1, GCA_002848135.1, GCA_001507555.1, GCA_001507535.1, GCA_003991075.1, GCA_004028275.1, GCA_004786015.1, GCA_004293625.1, GCA_011398155.1, GCA_011398355.1, GCA_900128515.1, GCA_902556205.1, GCA_902593395.1, GCA_902509975.1, GCA_003326015.1, GCA_902509905.1, GCA_902512035.1, GCA_902512305.1, GCA_902512815.1, GCA_902513645.1, GCA_902556275.1, GCA_902556695.1, GCA_902606745.1, GCA_003711265.1, GCA_900127575.1, GCA_001547755.1, GCA_900127505.1, GCA_900180335.1, GCA_900180345.1, GCA_003967195.1, GCA_003932505.1, GCA_902619265.1, GCA_902580155.1, GCA_902535365.1, GCA_902518645.1, GCA_902529055.1, GCA_902620825.1, GCA_902587485.1, GCA_902620785.1, GCA_000385055.1, GCA_902558395.1, GCA_902525635.1, GCA_902516285.1, GCA_902515775.1, GCA_902557815.1, GCA_902593675.1, GCA_902599315.1, GCA_902543555.1, GCA_902554915.1, GCA_902557645.1, GCA_902571725.1, GCA_902594515.1, GCA_902600705.1, GCA_902613155.1, GCA_902628925.1, GCA_902611885.1, GCA_902563705.1, GCA_902578455.1, GCA_902613455.1, GCA_902616715.1, GCA_902516485.1, GCA_902526045.1, GCA_902570035.1, GCA_902578495.1, GCA_902579635.1, GCA_902581455.1, GCA_902589965.1, GCA_902594855.1, GCA_902596665.1, GCA_902612395.1, GCA_902613895.1, GCA_902541365.1, GCA_011009015.1, GCA_003725715.1, GCA_000259575.1, GCA_902705855.1, GCA_902705875.1, GCA_000422345.1, GCA_003054775.1, GCA_003367315.1, GCA_004341165.1, GCA_002237535.1, GCA_003577475.1, GCA_001529285.1, GCA_001529305.1, GCA_001907715.1, GCA_004379315.1, GCA_002741105.1, GCA_003576265.1, GCA_001592875.1, GCA_001543265.1, GCA_001839645.1, GCA_003184125.1, GCA_004521985.1, GCA_002251635.1, GCA_003952245.1, GCA_007293365.1, GCA_003184135.1, GCA_003813925.1, GCA_002022265.1, GCA_002022335.1, GCA_003626995.1, GCA_001042895.1, GCA_010095445.1, GCA_003797905.1, GCA_003797945.1, GCA_001989375.1, GCA_002903165.1, GCA_005096325.1, GCA_002307495.1, GCA_010669185.1, GCA_000970615.1, GCA_001648195.1, GCA_003293815.1, GCA_004010935.1, GCA_900129835.1, GCA_002929225.1, GCA_003864275.1, GCA_009737025.1, GCA_002192765.1, GCA_002192775.1, GCA_002237405.1, GCA_002237425.1, GCA_003176695.1, GCA_003185875.1, GCA_003836565.1, GCA_003836685.1, GCA_003836805.1, GCA_003837405.1, GCA_003837415.1, GCA_003837505.1, GCA_003975305.1, GCA_003975315.1, GCA_003975325.1, GCA_003975335.1, GCA_003975385.1, GCA_003976125.1, GCA_003976135.1, GCA_003976165.1, GCA_003976175.1, GCA_003976185.1, GCA_006802095.1, GCA_001444425.1, GCA_001642735.1, GCA_001642775.1, GCA_902562425.1, GCA_902527245.1, GCA_902535095.1, GCA_902569385.1, GCA_902600405.1, GCA_902615375.1, GCA_902596775.1, GCA_003258515.1, GCA_003789045.1, GCA_004327985.1, GCA_003007675.1, GCA_001574445.1, GCA_002116735.1, GCA_003997005.1, GCA_006516615.1, GCA_003363485.1, GCA_002806975.1, GCA_003318275.1, GCA_003336705.1, GCA_003344045.1, GCA_003441595.1, GCA_003994855.1, GCA_004353225.1, GCA_004792665.1, GCA_007559285.1, GCA_007671655.1, GCA_007671675.1, GCA_004135205.1, GCA_004851605.1, GCA_008727795.1, GCA_001305295.1, GCA_003345655.1, GCA_001651805.1, GCA_900111095.1, GCA_003858655.1, GCA_003957515.1, GCA_004378465.1, GCA_001435845.1, GCA_001435295.1, GCA_003209315.1, GCA_001444505.1, GCA_001484985.1, GCA_001936495.1, GCA_003259175.1, GCA_001624595.1, GCA_001624705.1, GCA_002792415.1, GCA_900129155.1, GCA_900089975.1, GCA_900089985.1, GCA_003259225.1, GCA_001639695.1, GCA_003362755.1, GCA_003721245.1, GCA_004352855.1, GCA_902612085.1, GCA_009746715.1, GCA_902556425.1, GCA_003206715.1, GCA_004798965.1, GCA_001039575.1, GCA_004117855.1, GCA_007786325.1, GCA_002879635.1, GCA_003028575.1, GCA_005937175.1, GCA_009728585.1, GCA_003298795.1, GCA_007182875.1, GCA_003254665.1, GCA_003056325.1, GCA_003856855.1, GCA_003031405.1, GCA_000800185.1, GCA_003056305.1, GCA_007991155.1, GCA_003612795.1, GCA_002211105.1, GCA_000943375.1, GCA_001576535.1, GCA_001596805.1, GCA_005218165.1, GCA_007163885.2, GCA_011398715.1, GCA_003950215.1, GCA_004798905.1, GCA_007989605.1, GCA_010179695.1, GCA_011399095.1, GCA_002916775.1, GCA_004006355.1, GCA_000754225.1, GCA_003032495.1, GCA_004337515.1, GCA_007989625.1, GCA_902631395.1, GCA_002866825.1, GCA_001983995.1, GCA_902705825.1, GCA_003719295.1, GCA_010669285.1, GCA_003402235.1, GCA_001583435.1, GCA_001646945.1, GCA_010994325.1, GCA_010994335.1, GCA_004762125.1, GCA_003259155.1, GCA_003076275.1, GCA_001507605.1, GCA_001750105.1, GCA_003762925.1, GCA_011440395.1, GCA_011602085.1, GCA_011602365.1, GCA_902141825.1, GCA_003259185.1, GCA_000299335.2, GCA_001411415.1, GCA_001611695.1, GCA_001602235.1, GCA_002888555.1, GCA_003597125.1, GCA_002864685.1, GCA_900537055.1, GCA_001602255.1, GCA_002837115.1, GCA_004360225.1, GCA_902705835.1, GCA_902705845.1, GCA_902705865.1, GCA_004421105.1, GCA_002952115.1, GCA_004832235.1, GCA_007625165.1, GCA_003149435.1, GCA_003260285.1, GCA_000215955.3, GCA_003788585.1, GCA_003788635.1, GCA_003151135.1, GCA_002088235.1, GCA_005047655.1, GCA_005931095.1, GCA_003932755.1, GCA_003584645.1, GCA_004168015.1, GCA_000444935.1, GCA_003097315.1, GCA_005096345.1, GCA_009734265.1, GCA_002215215.1, GCA_902521725.1, GCA_902613735.1, GCA_902624655.1, GCA_902597385.1, GCA_001895265.1, GCA_007923265.1, GCA_003290445.1, GCA_003428165.1, GCA_003574425.1, GCA_003574475.2, GCA_902563055.1, GCA_002224265.1, GCA_003263785.1, GCA_001547935.1, GCA_900089835.1, GCA_002875145.1, GCA_900382745.1, GCA_001974615.1, GCA_002873455.1, GCA_001558055.1, GCA_002954555.1, GCA_005281815.1, GCA_007786255.1, GCA_007786305.1, GCA_001691275.1, GCA_001974565.1, GCA_002873485.1, GCA_002873565.1, GCA_002873645.1, GCA_002873695.1, GCA_002873735.1, GCA_002875005.1, GCA_002875045.1, GCA_002875065.1, GCA_002875085.1, GCA_002875095.1, GCA_002875225.1, GCA_002875305.1, GCA_002875345.1, GCA_002875395.1, GCA_002875495.1, GCA_002875585.1, GCA_003049845.1, GCA_003049855.1, GCA_003049865.1, GCA_003049905.1, GCA_003049925.1, GCA_003049945.1, GCA_003049965.1, GCA_003049975.1, GCA_003050005.1, GCA_003050025.1, GCA_003050045.1, GCA_003050125.1, GCA_003050145.1, GCA_003050165.1, GCA_003050175.1, GCA_003050205.1, GCA_003050225.1, GCA_003050245.1, GCA_003050255.1, GCA_003050285.1, GCA_003050305.1, GCA_003050315.1, GCA_003050345.1, GCA_003050355.1, GCA_003050385.1, GCA_003050405.1, GCA_003050425.1, GCA_003050445.1, GCA_003050465.1, GCA_003050485.1, GCA_003050505.1, GCA_003050545.1, GCA_003345295.1, GCA_003573805.1, GCA_003667985.1, GCA_900089845.1, GCA_003144035.1, GCA_001974575.1, GCA_002875555.1, GCA_002875605.1, GCA_002875685.1, GCA_002875705.1, GCA_002875885.1, GCA_002875905.1, GCA_002873395.1, GCA_002873335.1, GCA_002835515.1, GCA_003584965.1, GCA_010587385.1, GCA_003318175.1, GCA_000785575.1, GCA_000808535.1, GCA_000808555.1, GCA_000286955.2, GCA_900163965.1, GCA_900143745.1, GCA_003350325.1, GCA_000736345.1, GCA_001497485.1, GCA_003076895.1, GCA_003119375.1, GCA_004194515.1, GCA_006369615.1, GCA_006372965.1, GCA_010692765.1, GCA_004349325.1, GCA_900460395.1, GCA_003443775.1, GCA_003726935.1, GCA_900088415.1, GCA_003263775.1, GCA_003263805.1, GCA_001974605.1, GCA_002873075.1, GCA_002873115.1, GCA_002873185.1, GCA_002873265.1, GCA_002873475.1, GCA_002873555.1, GCA_002873755.1, GCA_002873795.1, GCA_002873855.1, GCA_002873875.1, GCA_002873895.1, GCA_002873955.1, GCA_002873995.1, GCA_002875625.1, GCA_002875665.1, GCA_002875715.1, GCA_002875745.1, GCA_002875785.1, GCA_002875805.1, GCA_002875825.1, GCA_002875845.1, GCA_002875865.1, GCA_002875965.1, GCA_900382755.1, GCA_002875945.1, GCA_002875385.1, GCA_002929905.1, GCA_002929925.1, GCA_002929935.1, GCA_002929945.1, GCA_002930005.1, GCA_002930015.1, GCA_002930045.1, GCA_002954525.1, GCA_002929865.1, GCA_002929885.1, GCA_002196515.1, GCA_007050385.1, GCA_011440455.1, GCA_001691185.1, GCA_004522045.1, GCA_001691175.1, GCA_002873015.1, GCA_002873095.1, GCA_002873235.1, GCA_002873285.1, GCA_002873345.1, GCA_002873375.1, GCA_002873405.1, GCA_002873515.1, GCA_002873745.1, GCA_002873815.1, GCA_002873825.1, GCA_002873905.1, GCA_002873935.1, GCA_002873965.1, GCA_002875015.1, GCA_002875125.1, GCA_002875465.1, GCA_002875755.1, GCA_005144905.1, GCA_001691235.1, GCA_002875485.1, GCA_002875525.1, GCA_002873045.1, GCA_003050065.1, GCA_003050085.1, GCA_003050105.1, GCA_003050585.1, GCA_003050605.1, GCA_000983095.1, GCA_001486525.1, GCA_001558025.1, GCA_002156455.1, GCA_900183395.1, GCA_000763535.2, GCA_002286655.1, GCA_011212705.1, GCA_000299535.2, GCA_000318075.1, GCA_007050355.1, GCA_007050395.1, GCA_900604915.1, GCA_004022545.1, GCA_900089965.1, GCA_000259875.1, GCA_002893865.1, 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GCA_902602785.1, GCA_902538145.1, GCA_902550245.1, GCA_902530885.1, GCA_003215895.1, GCA_902602935.1, GCA_902602145.1, GCA_902635295.1, GCA_902615345.1, GCA_902629495.1, GCA_902585855.1, GCA_902569815.1, GCA_003212005.1, GCA_902529275.1, GCA_003214635.1, GCA_902572695.1, GCA_003213315.1, GCA_003212195.1, GCA_902554565.1, GCA_902554335.1, GCA_902530975.1, GCA_902543185.1, GCA_902633695.1, GCA_902604565.1, GCA_902571165.1, GCA_902612505.1, GCA_902585715.1, GCA_902557705.1, GCA_902580285.1, GCA_902539895.1, GCA_003283745.1, GCA_902598935.1, GCA_902581665.1, GCA_902635725.1, GCA_003215295.1, GCA_902549535.1, GCA_902543545.1, GCA_902531245.1, GCA_902556105.1, GCA_902585205.1, GCA_902633585.1, GCA_902569615.1, GCA_003214115.1, GCA_902523125.1, GCA_902530005.1, GCA_902558965.1, GCA_902615845.1, GCA_902616095.1, GCA_902613685.1, GCA_902589435.1, GCA_902619625.1, GCA_902602655.1, GCA_902567635.1, GCA_902529515.1, GCA_902557915.1, GCA_902596585.1, GCA_902633965.1, GCA_902562825.1, GCA_902550285.1, GCA_003208935.1, GCA_902526275.1, GCA_902530455.1, GCA_902633535.1, GCA_902592425.1, GCA_902581545.1, GCA_003209665.1, GCA_003280645.1, GCA_902518995.1, GCA_902512765.1, GCA_902578355.1, GCA_902556865.1, thanks to the submitters and researchers of the data.

How to site the dataset :

To respect the results of the dataset creator and updater, it is recommended to reference the dataset accession ID in the article ：

The dataset that support this study is DATAXXXXXX which was created in CNGBdb（https://db.cngb.org）

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The total number of samples is counted. One row is a run in the right Run data table.

PMGR Prokaryote 12741 8

A -
Source: RefSeq Assembly ( ID GCF_009002475.1 )

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Source: RefSeq Assembly ( ID GCF_009017255.1 )

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Source: RefSeq Assembly ( ID GCF_009017275.1 )

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Tree view The total number of samples is counted. One row is a run in the right Run data table.

PMGR Prokaryote 12741 8

A- Source: RefSeq Assembly ( ID GCF_009002475.1 )

A- Source: RefSeq Assembly ( ID GCF_009017255.1 )

A- Source: RefSeq Assembly ( ID GCF_009017275.1 )

Other details

Associated dataset

Resource

Popular database

CNGBdb information

CNGBdb Wechat

Tree view
The total number of samples is counted. One row is a run in the right Run data table.

A -
Source: RefSeq Assembly ( ID GCF_009002475.1 )

A -
Source: RefSeq Assembly ( ID GCF_009017255.1 )

A -
Source: RefSeq Assembly ( ID GCF_009017275.1 )