Analysis

BLAST stands for Basic Local Alignment Search Tool. The BLAST service of CNGB is developed with NCBI BLAST+ 2.6.0 standalone version, downloaded from NCBI FTP server, providing sequences searching on public data of CNGB applications, BGI projects and external data sources. For example, BLAST integrates datasets from the Transcriptomes of 1,000 Plants (ONEKP), datasets for thousands of Transcriptomes of 1,000 Fishes (FISHT1K), NCBI's nr, nt databases, etc. The word, BLAST, in the name "the BLAST service of CNGB", is standing for kinds of sequence searching method. More types of sequence searching algorithms will be integrated in the future.

DISSECT is a comprehensive data integration platform for cancer research, including the first mirror site of ICGC Data Portal in China, which provides important resources for domestic researchers. Based on the big data research, we devote to an integrated platform with multi-omics data and various analytic tools, in an effort to help users dissect data of common database and their own. Those analyses, from single cluster and single data type to cross clusters and multi data types, are all well-designed to be easy to use. With the DISSECT tool, you need to select the data you want to analyze (https://db.cngb.org/dissect/data/) and then select the analysis tool to analyze the data. DISSECT provides sample data of 47,277 different phenotypes for researchers to select and analyze.

PVD contains information of pathogenic microbes that cause human infectious diseases, including pathogen classification, biological characteristics, nucleic acid sequence,disease phenotype and patient immunological characteristics. It includes three sub-databases: chronic infectious disease pathogens database, emerging infectious disease pathogens database, and major infectious disease pathogens database,providing the search and identification tools for clinicians and researchers.