ONEKP: BLAST for 1,000 Plants


This website performs BLAST searches on the 1000 plant (1KP) trancriptomes data described in the following publications. Access is freely given but if you publish using the data we would appreciate that you cite the following manuscripts.

Manuscripts

J.H. Leebens-Mack, M.S. Barker, E.J. Carpenter, M.K. Deyholos, M.A. Gitzendanner, S.W. Graham, I. Grosse, Z. Li, M. Melkonian, S. Mirarab, ... G.K. Wong. Oct 2019. One thousand plant transcriptomes and the phylogenomics of green plants. Nature 574: 679-685. PMID: 31645766. DOI: 10.1038/s41586-019-1693-2

E.J. Carpenter, N. Matasci, S. Ayyampalayam, S. Wu, J. Sun, J. Yu, F.R. Jimenez Vieira, C. Bowler, R.G. Dorrell, M.A. Gitzendanner, ... G.K. Wong. Oct 2019. Access to RNA-sequencing data from 1173 plant species: The 1000 plant transcriptomes initiative (1KP). GigaScience 8: giz126. PMID: 31644802. DOI: 10.1093/gigascience/giz126

Problem feedback

Problems with or questions about this website should be directed to NGB_DC@genomics.cn. Contacting someone else may not respond.

Data download

CNGBdb has created 1kp Dataset that you can download datafiles easily at: https://db.cngb.org/datamart/plant/DATApla4/.

Major supporters