PIRD: Pan immune repertoire database


Pan immune repertoire database (PIRD) collects raw and processed sequences of immunoglobulins (IGs) and T cell receptors (TCRs) of human and other vertebrate species with different phenotypes. You can check the detailed information of each sample in the database, choose samples to analyze according to your need, and upload data to analyze. Your analysis results will be auto-saved, so you can return to check them at any time.

PIRD is developed by the immune and health lab of BGI-research. Details are described in this paper: https://doi.org/10.1101/399493, and please cite it if you use it in your work:

1. ZHANG W, Wang L, Liu K, Wei X, Yang K, Du W, Wang S, Guo N, Ma C, Luo L, et al. PIRD: Pan immune repertoire database. bioRxiv (2018) doi:10.1101/399493

Filter


Example: you can enter health, HIV vaccine, homo sapiens, or S18081201000102 as keyword.

Five major characteristics of the site


Information retrieval

In PIRD, you can check the experiment information, phenotypic information, sequence information of each sample.

Knowledge check

In TBAdb, you can find the T and B cell receptor specific to known antigen or disease.

Data analysis

We provide some analysis tools; you can use these tools to analyze your concerning data in public or submitted by yourself.

Data visualize

In PIRD, we provide some data visualization tools, and you can draw some high quality images using these tools.

Project create

You can create your own project and submit your data to share with other researchers.

Statistics of project