MDB: Microbiome Database

Microbiome database involves the sequencing resource and metadata of ecological community samples of microorganisms, including both host-associated or environmental microbes. This database provides detailed and accurate metadata of these metagenomics samples, as well as gene catalogs for host-associated microbiome, and moreover, well-characterized isolated strains can be found in our database too.

Search

Note: you can enter sample ID, Project ID, species key words.Example: CNShis0002884, CNPhis0000073, Bacteroides dorei.

Sequence

BLAST stands for Basic Local Alignment Search Tool. The BLAST service of CNGB is developed with NCBI BLAST+ 2.6.0 standalone version, downloaded from NCBI FTP server, providing sequences searching on public data of CNGB applications.

Biomes

Fecal (human)
Marine
Oral
Soil
Saliva
Oceanic
Skin
Plants
Vagina
Fecal (Mammals)
Rhizosphere
Sediment
Insecta
Activated Sludge
Coastal
Ceca
Digestive system

Data type

Project
Sample
Experiment/Run
Assembly