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Datasets(10 / 231 results)
More results >>
Spatial transcriptomic landscape unveils immunoglobin-associated senescence as a hallmark of aging
Mus musculus
Stereo-seq
A spatial transcriptome atlas of the mammalian whole cerebella
Mus musculus
Macaca
Mico leucippe
Stereo-seq | snRNA
MCNSTA: Mouse Cochlear Nucleus Spatiotemporal Transcriptomic Atlas
Mus musculus
Stereo-Seq
A cellular resolution spatial transcriptomic landscape of the adult human cortex
Homo sapiens
Stereo-Seq
Cholestatic Injury and Repair Spatio-Temporal Atlas
Mus musculus
Stereo-Seq
Macaque Hypothalamus Atlas for Obesity and Diabetes
Macaca fascicularis
Stereo-Seq
RNA-seq
Optimization and application of clustering algorithms in integrated analysis of multiomics dataset
Mus musculus
Stereo-Seq
ASRSSTA: Arabidopsis Shoot Regeneration Single-cell Spatiotemporal Transcriptomic Atlas
Arabidopsis thaliana
Stereo-Seq
scRNA
RNA-seq
A spatial transcriptome map of developing maize ear
Zea mays
Stereo-Seq
scRNA
Publications(10 / 7,339 results)
More results >>
Morphological diversification and functional maturation of human astrocytes in glia-enriched cortical organoid transplanted in mouse brain.
Nat Biotechnol,2024/2/28;
Harnessing spatial transcriptomics for advancing plant regeneration research.
Trends Plant Sci,2024/2/27;
Single-nucleus RNA sequencing demonstrates an autosomal dominant Alzheimer's disease profile and possible mechanisms of disease protection.
Neuron,2024/2/21;
Spatial transcriptomic analysis of tumour-immune cell interactions in melanoma arising from congenital melanocytic nevus.
J Eur Acad Dermatol Venereol,2024/2/29;
Cellular neighborhood analysis in spatial omics reveals new tissue domains and cell subtypes.
Nat Genet,2024/2/27;
BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis.
Nat Genet,2024/2/27;
Principled and interpretable alignability testing and integration of single-cell data.
Proc Natl Acad Sci U S A,2024/3/05;121(10):e2313719121.
Metabolic heterogeneity in clear cell renal cell carcinoma revealed by single-cell RNA sequencing and spatial transcriptomics.
J Transl Med,2024/2/27;22(1):210.
Integrative single-cell transcriptomic analyses reveal the cellular ontological and functional heterogeneities of primary and metastatic liver tumors.
J Transl Med,2024/2/27;22(1):206.
STGIC: A graph and image convolution-based method for spatial transcriptomic clustering.
PLoS Comput Biol,2024/2/28;20(2):e1011935.
Project(10 / 40 results)
More results >>
Spatially resolved multi-omics analytics of pituitary plasticity in mammalsSource: STOmics DB
(ID:
STT0000021
)
BGI Stereomics Stereo-Seq
Homo sapiens
Public Datasets of STOmicsSource: STOmics DB
(ID:
STT0000124
)
BGI Stereomics Stereo-Seq
Rattus norvegicus
Mus musculus
Microbiota-mediated shaping of mouse spleen structure and immune function characterized by scRNA-seq and Stereo-seqSource: STOmics DB
(ID:
STT0000089
)
BGI Stereomics Stereo-Seq
Mus musculus
Fate Determination of Cancer-associated Fibroblast Drives Polarized Immunity in Cancer-stroma BoundarySource: STOmics DB
(ID:
STT0000036
)
BGI Stereomics Stereo-Seq
Homo sapiens
Spatiotemporal landscape of murine thymus reveals B cell-enriched inflammatory niche in thymus aging[Stereo-seq]Source: STOmics DB
(ID:
STT0000120
)
BGI Stereomics Stereo-Seq
Mus musculus
Spatial transcriptomic landscape unveils immunoglobin-associated senescence as a hallmark of agingSource: STOmics DB
(ID:
STT0000039
)
BGI Stereomics Stereo-Seq
Mus musculus
stereo-seq data of primary lung and liver organoidSource: STOmics DB
(ID:
STT0000115
)
BGI Stereomics Stereo-Seq
Mus musculus
Single-cell and spatiotemporal transcriptomic reveals the effects of microorganisms on immunity and metabolism in mouse liverSource: STOmics DB
(ID:
STT0000034
)
BGI Stereomics Stereo-Seq
Mus musculus
A Spatiotemporal Dynamic Immune Landscape of the COVID-19 Hamster Lung [Spatiotemporal]Source: STOmics DB
(ID:
STT0000006
)
BGI Stereomics Stereo-Seq
Mesocricetus auratus
Hypoxia induced cellular changes in multiple organs and a novel immunoregulatory cell type in spleenSource: STOmics DB
(ID:
STT0000005
)
BGI Stereomics Stereo-Seq
Mus musculus
Samples(10 / 7,710 results)
More results >>
Mouse_Semi_Brain_Stereo-seq_FF_V1.2_ssDNA
ID STSA0000877(Source: Submission)
Mus musculus
brain
Stereo-Seq
Mouse_Tongue_Stereo-seq_FF_V1.2_ssDNA
ID STSA0000878(Source: Submission)
Mus musculus
tongue
Stereo-Seq
Mouse_Olfactory_Bulb_Stereo-seq_FF_V1.2_DAPI
ID STSA0000881(Source: Submission)
Mus musculus
olfactory bulb
Stereo-Seq
Mouse_Embryo_Stereo-seq_FF_LCD_V1.0_DAPI
ID STSA0000882(Source: Submission)
Mus musculus
embryo
Stereo-Seq
Authors(10 / 36,986 results)
More results >>
Satija, Rahul (Satija R)
New York Genome Center, New York, USA. rsatija@nygenome.org.
Stuart, Tim (Stuart T)
New York Genome Center, New York, NY, USA.
Butler, Andrew (Butler A)
New York Genome Center, New York, USA.
Stoeckius, Marlon (Stoeckius M)
Technology Innovation Lab, New York Genome Center, New York, NY 10013, USA.
Mauck, William M 3rd (Mauck WM 3rd)
Center for Genomics and Systems Biology, New York University, New York, NY 10003,
Hao, Yuhan (Hao Y)
Center for Genomics and Systems Biology, New York University, New York, NY 10003,
Hoffman, Paul (Hoffman P)
Center for Genomics and Systems Biology, New York University, New York, NY 10003,
Smibert, Peter (Smibert P)
Technology Innovation Lab, New York Genome Center, New York, NY 10013, USA.
Papalexi, Efthymia (Papalexi E)
Center for Genomics and Systems Biology, New York University, New York, NY 10003,
Hafemeister, Christoph (Hafemeister C)
New York Genome Center, New York, NY, USA.