Satija, Rahul

(Satija R)

ORCID: 0000-0001-9448-8833

Cited by: 3,598 STOmics papers: 7

Affiliation: New York Genome Center, New York, USA. rsatija@nygenome.org.

Research areas

Co-authors

MERFISHing for spatial context.

Authors:Shalek, Alex K; Satija, Rahul

Journal:Trends Immunol,2015/7;36(7):390-1.

Keywords:MERFISH; Spatial Transcriptomics

IF: 19.709

Cited by: 4

The Human Cell Atlas.

Authors:Regev, Aviv; Teichmann, Sarah A; Lander, Eric S; Amit, Ido; Benoist, Christophe; Birney, Ewan; Bodenmiller, Bernd; Campbell, Peter; Carninci, Piero; Clatworthy, Menna; Clevers, Hans; Deplancke, Bart; Dunham, Ian; Eberwine, James; Eils, Roland; ...More

Journal:Elife,2017/12/05;6

Keywords:Gene Expression; Omics; MERFISH; IMC; TIVA; cell atlas; cell biology; computational biology; human; lineage; mouse; science forum; single-cell genomics; systems biology

IF: 8.713

Cited by: 1,319

Integrative single-cell analysis.

Authors:Stuart, Tim; Satija, Rahul

Journal:Nat Rev Genet,2019/05;20(5):257-272.

Keywords:smFISH; Spatial reconstruction; SPLiT-seq; Seurat; Spatial Proteomics; seqFISH+; osmFISH; Spatial Transcriptomics; STARmap

IF: 59.581

Cited by: 788

Comprehensive Integration of Single-Cell Data.

Authors:Stuart, Tim; Butler, Andrew; Hoffman, Paul; Hafemeister, Christoph; Papalexi, Efthymia; Mauck, William M 3rd; Hao, Yuhan; Stoeckius, Marlon; Smibert, Peter; Satija, Rahul

Journal:Cell,2019/06/13;177(7):1888-1902.e21.

Keywords:smFISH; Spatial Omics; Spatial reconstruction; Seurat; CODEX; osmFISH; STARmap; Spatial Gene Expression; integration; multi-modal; scATAC-seq; scRNA-seq; single cell; single-cell ATAC sequencing; single-cell RNA sequencing

IF: 66.850

Cited by: 8,013

Toward a Common Coordinate Framework for the Human Body.

Authors:Rood, Jennifer E; Stuart, Tim; Ghazanfar, Shila; Biancalani, Tommaso; Fisher, Eyal; Butler, Andrew; Hupalowska, Anna; Gaffney, Leslie; Mauck, William; Eraslan, Gökçen; Marioni, John C; Regev, Aviv; Satija, Rahul

Journal:Cell,2019/12/12;179(7):1455-1467.

Keywords:MERFISH; Slide-seq; Spatial reconstruction; Spatial Anatomic

IF: 66.850

Cited by: 65

Integrated analysis of multimodal single-cell data.

Authors:Hao, Yuhan; Hao, Stephanie; Andersen-Nissen, Erica; Mauck, William M 3rd; Zheng, Shiwei; Butler, Andrew; Lee, Maddie J; Wilk, Aaron J; Darby, Charlotte; Zager, Michael; Hoffman, Paul; Stoeckius, Marlon; Papalexi, Efthymia; Mimitou, Eleni P; Jain, Jaison; ...More

Journal:Cell,2021/06/24;184(13):3573-3587.e29.

Keywords:Omics; Gene Expression; Seurat; CITE-seq; COVID-19; T cell; immune system; multimodal analysis; reference mapping; single cell genomics

IF: 66.850

Cited by: 3,880

geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq.

Authors:Missarova, Alsu; Jain, Jaison; Butler, Andrew; Ghazanfar, Shila; Stuart, Tim; Brusko, Maigan; Wasserfall, Clive; Nick, Harry; Brusko, Todd; Atkinson, Mark; Satija, Rahul; Marioni, John C

Journal:Genome Biol,2021/12/06;22(1):333.

Keywords:Spatial Transcriptomics

IF: 17.906

Cited by: 10

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