Spatial RNA sequencing of mouses brain slices following spatial object recognition training(Dataset ID: STDS0000269)

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Spots: 16,428
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Genes: 32,285
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PMID: 37773230
Summary
Sample
Catalog
Dataset information
Contributors
Accessions
How to cite
Dataset information
Summary:
We report a spatial transcriptomics dataset of mouse brain tissue generated with the 10x Genomics Visium platform to identify gene expression profiles of spatial object recognition training.
Overall design:
We performed spatial gene expression profiling analysis using Visium data obtained from coronal mouse brain sections of 2 groups (trained vs. home cage).
Technology:
ST
Platform:
Illumina NovaSeq 6000
Species:
Mus musculus
Tissues:
brain
Sex:
Male
Submission date: 2022-04-26Update date: 2024-10-10
Sample number: 6Section number: 6
DOI: To be continue
Contributors
Bahl, Ethan; Chatterjee, Snehajyoti; Elsadany, Muhammad; Vanrobaeys, Yann; Lin, Li-Chun; Giese, Peter; Abel, Ted; Michaelson, Jacob J
Contact: contrib1
Accessions
GEO Series Accessions: GSE201610
How to cite
  • Cite database of STOmicsDB:
    [1] Xu, Zhicheng et al. "STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization." Nucleic acids research vol. 52,D1 (2024): D1053-D1061. doi: 10.1093/nar/gkad933'
  • Cite visualization dataset:
    [2] Bahl, Ethan. Spatial RNA sequencing of mouses brain slices following spatial object recognition training[DS/OL]. STOmicsDB, 2022[2022-04-26]. https://db.cngb.org/stomics/datasets/STDS0000269/. doi: xxxxxx
    #Format: {contributors}. {title}[DS/OL]. STOmicsDB, {the year of submission data}[{submission data}]. {dataset link}. doi: {doi ID}
  • Cite original data article:
    No results.