Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering(Dataset ID: STDS0000224)

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PMID: 37081484
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Differential analysis
Cell-cell interactions
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Differential analysis

The cluster marker genes with an adjusted P-value<0.05 were selected. We defined cluster markers with a log2 fold change of more than 0.15 as upregulated genes, and performed GO and KEGG pathways enrichment analyses on upregulated genes by clusterProfiler (version 4.9.2).

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