Spatiotemporal transcriptome atlas of human embryos after gastrulation
IDSTT0000025(Source: STOmics DB)
STOmics technology:BGI Stereomics Stereo-Seq
Organism(s):
Homo sapiens
Data type:Raw sequence reads, Spatial transcriptomics
Sample scope:Monoisolate
Summary:Leveraging Stereo-seq technology, we generated spatial transcriptomic profiles across 77 sagittal sections of 13 whole human embryos ranging from Carnegie stage 12 to 23, integrated with single-nucleus RNA-seq to elucidate gene expression patterns within defined cellular contexts, revealing the cellular heterogeneity that drives organ-specific differentiation.
Contributor(s):Yuejiao Li, Qing Lan, Man Zhai, Shengwei Sui, Ya Gao.
Publication(s):
  • Yuejiao Li, Qing Lan, Man Zhai, Shengwei Sui, Ya Gao. Spatiotemporal transcriptome atlas of human embryos after gastrulation.
Submitter:李月娇(liyuejiao),BGI·Researsh
Release date:2023-07-14
Updated:2026-04-08
Statistics:
  • Sample: 13
  • Tissue Section: 77
  • Experiment: 4167
  • Run: 4167
Datasize:69.26TB
Sequencing Data
Spatial Gene Expression
ProjectSampleTissue SectionExperimentRunOrganismPlatformSequencing readsMask file