SAW: An efficient and accurate data analysis workflow for Stereo-seq spatial transcriptomics(Dataset ID: STDS0000234)

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1,171
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Spots: 2,343
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Genes: 24,302
Summary
Visualization
Data
Analysis results
Catalog
Statistics
Cluster markers
Differential analysis
Cell-cell interactions
Hotspots analysis
Spatial markers
Sections:

Differential analysis

The cluster marker genes with an adjusted P-value<0.05 were selected. We defined cluster markers with a log2 fold change of more than 0.15 as upregulated genes, and performed GO and KEGG pathways enrichment analyses on upregulated genes by clusterProfiler (version 4.9.2).

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