Spatially resolved transcriptomics revised human distal lung epithelial hierarchy [spatial transcriptomics](Dataset ID: STDS0000114)

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1,848
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868
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Spots: 2,220
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Genes: 36,601
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PMID: 35355018
Summary
Visualization
Data
Analysis results
Related
Sample
Catalog
Dataset information
Contributors
Accessions
How to cite
Dataset information
Summary:
We performed spatial transcriptomics using 10x Genomic Visium Spatial Gene Expression on human lung.
Overall design:
Spatial transcriptomics on normal human lung.
Technology:
10x Visium
Platform:
GPL24676
Species:
Homo sapiens(hg38)
Tissues:
Lung
Submission date: 2021-06-16Update date: 2022-01-18
Sample number: 2
DOI: To be continue
Contributors
Lakshminarasimha Murthy, Preetish K,Sontake, Vishwaraj,Tata, Aleksandra,Kobayashi, Yoshihiko,Tata, P
Contact: pt93@duke.edu, tata.lab@yahoo.com
Accessions
GEO Series Accessions: GSE178361
How to cite
  • Cite database of STOmicsDB:
    [1] Xu, Zhicheng et al. "STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization." Nucleic acids research vol. 52,D1 (2024): D1053-D1061. doi: 10.1093/nar/gkad933'
  • Cite visualization dataset:
    [2] Lakshminarasimha Murthy, Preetish K,Sontake, Vishwaraj,Tata, Aleksandra,Kobayashi, Yoshihiko,Tata, P. Spatially resolved transcriptomics revised human distal lung epithelial hierarchy [spatial transcriptomics][DS/OL]. STOmicsDB, 2021[2021-06-16]. https://db.cngb.org/stomics/datasets/STDS0000114/. doi: xxxxxx
    #Format: {contributors}. {title}[DS/OL]. STOmicsDB, {the year of submission data}[{submission data}]. {dataset link}. doi: {doi ID}
  • Cite original data article:
    Citation: Kadur Lakshminarasimha Murthy, Preetish et al. “Human distal lung maps and lineage hierarchies reveal a bipotent progenitor.” Nature vol. 604,7904 (2022): 111-119. doi:10.1038/s41586-022-04541-3