Spatial transcriptomic reference of the endometrium and myometrium of women in reproductive age(Dataset ID: STDS0000106)

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1,116
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Spots: 19,968
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Genes: 33,538
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PMID: 34857954
Summary
Visualization
Data
Analysis results
Sample
Catalog
Dataset information
Contributors
Accessions
How to cite
Dataset information
Summary:
Human uterine samples were analysed using Visium technology (10X Genomics) to generate a cellular 2D map of the endometrium to study its temporal and spatial changes across the menstrual cycle. Dataset comprises 4 samples from two women in their reproductive age.
Overall design:
menstrual cycle stage
Technology:
10x Visium
Species:
Homo sapiens(hg38)
Tissues:
Uterus
Development stage:
Adult,35-year-old to 39-year-old,21-year-old to 25-year-old
Sex:
Female
Submission date: 2021-08-11Update date: 2021-08-11
Sample number: 4
DOI: To be continue
Contributors
Luz Garcia-Alonso
Contact: lg18@sanger.ac.uk
Accessions
EMBL-EBI Accessions: E-MTAB-9260
How to cite
  • Cite database of STOmicsDB:
    [1] Xu, Zhicheng et al. "STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization." Nucleic acids research vol. 52,D1 (2024): D1053-D1061. doi: 10.1093/nar/gkad933'
  • Cite visualization dataset:
    [2] Luz Garcia-Alonso. Spatial transcriptomic reference of the endometrium and myometrium of women in reproductive age[DS/OL]. STOmicsDB, 2021[2021-08-11]. https://db.cngb.org/stomics/datasets/STDS0000106/. doi: xxxxxx
    #Format: {contributors}. {title}[DS/OL]. STOmicsDB, {the year of submission data}[{submission data}]. {dataset link}. doi: {doi ID}
  • Cite original data article:
    Citation: Garcia-Alonso, Luz et al. “Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro.” Nature genetics vol. 53,12 (2021): 1698-1711. doi:10.1038/s41588-021-00972-2