Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta(Dataset ID: STDS0000070)

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PMID: 32457985
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Dataset information
Summary:
Spatial transcriptomics by RNA-tomography (Tomo-seq) on whole or sub-dissected embryos (processed along the anterior-to-posterior axis) and on transversal thick slices (processed along the dorsal-to-ventral axis). 2019-03-15
Overall design:
overall_design is gone!
Technology:
Tomo-seq
Platform:
Illumina HiSeq 2500, Illumina NextSeq 500
Species:
Danio rerio(Zv9)
Gallus gallus(galGal4)
Homo sapiens(hg19)
Mus musculus(mm10)
Tissues:
Embryo
Development stage:
3 days, 4 days
Submission date: 2019-03-15Update date: 2020-09-07
Contributors
Laurent Yvernogeau; Ismaël Morin-Poulard; Anna Klaus; Joris Maas; Stefan Schulte-Merker; Eugene Berezikov; Jan P Junker; Catherine Robin
Contact: c.robin@hubrecht.eu
Accessions
GEO Series Accessions: GSE128350
Reference way
Citation: Yvernogeau, Laurent et al. “Multispecies RNA tomography reveals regulators of hematopoietic stem cell birth in the embryonic aorta.” Blood vol. 136,7 (2020): 831-844. doi:10.1182/blood.2019004446