Spatial transcriptomic profile of cervical squamous cell carcinoma(Dataset ID: STDS0000061)

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Spots: 233,087
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Genes: 43,344
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PMID: 35986392
Summary
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Dataset information
Summary:
To understand the etiological, structural, and immunological characteristics of cervical squamous cell carcinoma (CSCC), we conducted spatial transcriptomics (ST) experiments for cervical samples from 16 individuals.
Overall design:
To understand the etiological, structural, and immunological characteristics of cervical squamous cell carcinoma (CSCC), we conducted spatial transcriptomics (ST) experiments for cervical samples from 16 individuals.
Technology:
Stereo-Seq
Platform:
DNBSEQ-T10
Species:
Homo sapiens(hg38)
Tissues:
Cervical
Organ parts:
Cervical tissue
Cell types:
epithelial,fibroblast,endothelial (EC),myofibroblast,immune,Cancer,CAFs
Sex:
Female
Disease:
Cervical squamous cell carcinoma
Submission date: 2021-12-30Update date: 2021-12-30
Sample number: 18Section number: 18
DOI: To be continue
Contributors
Xun Xu,Yanzhou Wang,Junhua Li,Peng Wu
Contact: pengwu8626@tjh.tjmu.edu.cn
Accessions
Project ID: STT0000015
How to cite
  • Cite database of STOmicsDB:
    [1] Xu, Zhicheng et al. "STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization." Nucleic acids research vol. 52,D1 (2024): D1053-D1061. doi: 10.1093/nar/gkad933'
  • Cite visualization dataset:
    [2] Xun Xu,Yanzhou Wang,Junhua Li,Peng Wu. Spatial transcriptomic profile of cervical squamous cell carcinoma[DS/OL]. STOmicsDB, 2021[2021-12-30]. https://db.cngb.org/stomics/datasets/STDS0000061/. doi: xxxxxx
    #Format: {contributors}. {title}[DS/OL]. STOmicsDB, {the year of submission data}[{submission data}]. {dataset link}. doi: {doi ID}
  • Cite original data article:
    Citation: Ou, Zhihua et al. “Single-Nucleus RNA Sequencing and Spatial Transcriptomics Reveal the Immunological Microenvironment of Cervical Squamous Cell Carcinoma.” Advanced science (Weinheim, Baden-Wurttemberg, Germany) vol. 9,29 (2022): e2203040. doi:10.1002/advs.202203040