Seqtk
Update date: 2021-03-18

Description

Toolkit for processing sequences in FASTA/Q formats Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip.

Related

1

An automated approach to prepare tissue-derived spatially barcoded RNA-sequencing libraries.

Authors: Jemt, Anders; Salmén, Fredrik; Lundmark, Anna; Mollbrink, Annelie; Fernández Navarro, José; Ståhl, Patrik L; Yucel-Lindberg, Tülay; Lundeberg, Joakim
Journal: Sci Rep,2016/11/16;6:37137.
Keywords:Spatial Transcriptomics
IF: 4.996
Cited by: 48
2

Genetic basis for divergence in developmental gene expression in two closely related sea urchins.

Authors: Wang, Lingyu; Israel, Jennifer W; Edgar, Allison; Raff, Rudolf A; Raff, Elizabeth C; Byrne, Maria; Wray, Gregory A
Journal: Nat Ecol Evol,2020/06;4(6):831-840.
Keywords:Gene Expression
IF: 19.100
Cited by: 17
3

Enabling automated and reproducible spatially resolved transcriptomics at scale.

Authors: Stenbeck, Linnea; Taborsak-Lines, Fanny; Giacomello, Stefania
Journal: Heliyon,2022/6;8(6):e09651.
Keywords:Spatial Transcriptomics; Automation; High-throughput; Library preparation; RNA-sequencing; Spatial transcriptomics; Visium
IF: 0
Cited by: 5

Languages

Makefile
C

Accessions

URLshttps://github.com/lh3/seqtk