The spatiotemporal program of zonal liver regeneration following acute injury.
IF: 25.269
Cited by: 17


The liver carries a remarkable ability to regenerate rapidly after acute zonal damage. Single-cell approaches are necessary to study this process, given the spatial heterogeneity of liver cell types. Here, we use spatially resolved single-cell RNA sequencing (scRNA-seq) to study the dynamics of mouse liver regeneration after acute acetaminophen (APAP) intoxication. We find that hepatocytes proliferate throughout the liver lobule, creating the mitotic pressure required to repopulate the necrotic pericentral zone rapidly. A subset of hepatocytes located at the regenerating front transiently upregulate fetal-specific genes, including Afp and Cdh17, as they reprogram to a pericentral state. Zonated endothelial, hepatic stellate cell (HSC), and macrophage populations are differentially involved in immune recruitment, proliferation, and matrix remodeling. We observe massive transient infiltration of myeloid cells, yet stability of lymphoid cell abundance, in accordance with a global decline in antigen presentation. Our study provides a resource for understanding the coordinated programs of zonal liver regeneration.


Spatial Transcriptomics
acute liver failure
damage-induced liver injury
liver regeneration
liver zonation
single-cell transcriptomics
spatial transcriptomics

MeSH terms

Chemical and Drug Induced Liver Injury
Hepatic Stellate Cells
Liver Regeneration


Ben-Moshe, Shani
Veg, Tamar
Manco, Rita
Dan, Stav
Papinutti, Delfina
Lifshitz, Aviezer
Kolodziejczyk, Aleksandra A
Bahar Halpern, Keren
Elinav, Eran
Itzkovitz, Shalev