A subcellular cookie cutter for spatial genomics in human tissue.
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IF: 4.478
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Cited by: 5
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Abstract

Intracellular heterogeneity contributes significantly to cellular physiology and, in a number of debilitating diseases, cellular pathophysiology. This is greatly influenced by distinct organelle populations and to understand the aetiology of disease, it is important to have tools able to isolate and differentially analyse organelles from precise location within tissues. Here, we report the development of a subcellular biopsy technology that facilitates the isolation of organelles, such as mitochondria, from human tissue. We compared the subcellular biopsy technology to laser capture microdissection (LCM) that is the state-of-the-art technique for the isolation of cells from their surrounding tissues. We demonstrate an operational limit of  >20 µm for LCM and then, for the first time in human tissue, show that subcellular biopsy can be used to isolate mitochondria beyond this limit.

Keywords

Spatial Genomics
LCM-seq
Isolation
Mitochondria
Organelle
SICM
Subcellular

MeSH terms

Biopsy
Genomics
Humans
Laser Capture Microdissection

Authors

Bury, Alexander G
Pyle, Angela
Marcuccio, Fabio
Turnbull, Doug M
Vincent, Amy E
Hudson, Gavin
Actis, Paolo

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