Transcriptomic and epigenomic analyses uncovered Lrrc15 as a contributing factor to cartilage damage in osteoarthritis.
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IF: 4.996
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Abstract

In osteoarthritis (OA), articular chondrocytes display phenotypic and functional changes associated with epigenomic alterations. These changes contribute to the disease progression, which is characterized by dysregulated reparative processes and abnormal extracellular matrix remodeling leading to cartilage degradation. Recent studies using a murine model of posttraumatic OA highlighted the contribution of changes in DNA hydroxymethylation (5hmC) to OA progression. Here, we integrated transcriptomic and epigenomic analyses in cartilage after induction of OA to show that the structural progression of OA is accompanied by early transcriptomic and pronounced DNA methylation (5mC) changes in chondrocytes. These changes accumulate over time and are associated with recapitulation of developmental processes, including cartilage development, chondrocyte hypertrophy, and ossification. Our integrative analyses also uncovered that Lrrc15 is differentially methylated and expressed in OA cartilage, and that it may contribute to the functional and phenotypic alterations of chondrocytes, likely coordinating stress responses and dysregulated extracellular matrix remodeling.

Keywords

Omics
Gene Expression
Spatial Transcriptomics

MeSH terms

Animals
Cartilage, Articular
DNA Methylation
Epigenome
Epigenomics
Gene Expression Profiling
Humans
Male
Membrane Proteins
Mice
Osteoarthritis
Transcriptome

Authors

Singh, Purva
Wang, Mengying
Mukherjee, Piali
Lessard, Samantha G
Pannellini, Tania
Carballo, Camila B
Rodeo, Scott A
Goldring, Mary B
Otero, Miguel

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