Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields.
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IF: 19.328
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Cited by: 38
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Abstract

Nucleosomes package genomic DNA into chromatin. By regulating DNA access for transcription, replication, DNA repair, and epigenetic modification, chromatin forms the nexus of most nuclear processes. In addition, dynamic organization of chromatin underlies both regulation of gene expression and evolution of chromosomes into individualized sister objects, which can segregate cleanly to different daughter cells at anaphase. This collaborative review shines a spotlight on technologies that will be crucial to interrogate key questions in chromatin and chromosome biology including state-of-the-art microscopy techniques, tools to physically manipulate chromatin, single-cell methods to measure chromatin accessibility, computational imaging with neural networks and analytical tools to interpret chromatin structure and dynamics. In addition, this review provides perspectives on how these tools can be applied to specific research fields such as genome stability and developmental biology and to test concepts such as phase separation of chromatin.

Keywords

Immuno-SABER
Deep-PALM
ISS
CODEX
smFISH
Intron seqFISH
seqFISH+
3D-FISH
MERFISH
Gene Expression

MeSH terms

Chromatin
Chromosomes
DNA
DNA Repair
DNA Replication
Epigenesis, Genetic
Humans
Nucleosomes

Authors

Agbleke, Andrews Akwasi
Amitai, Assaf
Buenrostro, Jason D
Chakrabarti, Aditi
Chu, Lingluo
Hansen, Anders S
Koenig, Kristen M
Labade, Ajay S
Liu, Sirui
Nozaki, Tadasu
Ovchinnikov, Sergey
Seeber, Andrew
Shaban, Haitham A
Spille, Jan-Hendrik
Stephens, Andrew D
Su, Jun-Han
Wadduwage, Dushan

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