Neuroblast-specific open chromatin allows the temporal transcription factor, Hunchback, to bind neuroblast-specific loci.
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IF: 8.713
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Cited by: 24
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Abstract

Spatial and temporal cues are required to specify neuronal diversity, but how these cues are integrated in neural progenitors remains unknown. Drosophila progenitors (neuroblasts) are a good model: they are individually identifiable with relevant spatial and temporal transcription factors known. Here we test whether spatial/temporal factors act independently or sequentially in neuroblasts. We used Targeted DamID to identify genomic binding sites of the Hunchback temporal factor in two neuroblasts (NB5-6 and NB7-4) that make different progeny. Hunchback targets were different in each neuroblast, ruling out the independent specification model. Moreover, each neuroblast had distinct open chromatin domains, which correlated with differential Hb-bound loci in each neuroblast. Importantly, the Gsb/Pax3 spatial factor, expressed in NB5-6 but not NB7-4, had genomic binding sites correlated with open chromatin in NB5-6, but not NB7-4. Our data support a model in which early-acting spatial factors like Gsb establish neuroblast-specific open chromatin domains, leading to neuroblast-specific temporal factor binding and the production of different neurons in each neuroblast lineage.

Keywords

Spatial Genomics
D. melanogaster
DamID
chromatin
developmental biology
neuroblast
neuroscience
spatial patterning
stem cell
temporal identity

MeSH terms

Animals
Brain
Cell Differentiation
Cell Lineage
Cell Proliferation
Chromatin
DNA-Binding Proteins
Drosophila Proteins
Drosophila melanogaster
Gene Expression Regulation, Developmental
Humans
Models, Biological
Neural Stem Cells
Neurons
Nuclear Proteins
PAX3 Transcription Factor
Protein Binding
Signal Transduction
Trans-Activators
Transcription Factors

Authors

Sen, Sonia Q
Chanchani, Sachin
Southall, Tony D
Doe, Chris Q

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