Spatial transcriptomic study of alveolar echinococcosis
IDSTT0000072(Source: STOmics DB)
STOmics technology:BGI Stereomics Stereo-Seq
Organism(s):
Mus musculus
Data type:Spatial transcriptomics
Sample scope:Monoisolate
Summary:Alveolar echinococcosis (AE) is characterized by increased infiltration of various immune cells around the lesion. To investigate the spatial transcriptional dynamics in AE lesions, we conducted Stereo-seq to generate the spatiotemporal transcriptomic atlas of mouse livers collected at multiple timepoints after Echinococcus multilocularis infection.
Contributor(s):Zhihua Ou.
Publication(s):
  • Zhihua Ou. Spatiotemporal transcriptomic profiling reveals the heterogenicity of neutrophils during alveolar echinococcosis progression.
Submitter:何凡(Fan He),BGI
Release date:2025-03-18
Updated:2025-03-18
Statistics:
  • Sample: 14
  • Tissue Section: 14
  • Experiment: 14
  • Run: 668
Datasize:5.68TB
Sequencing Data
Spatial Gene Expression
ProjectSampleTissue SectionExperimentRunOrganismPlatformSequencing readsMask file