Spatial gene expression-based, non-small cell lung carcinoma patients with paired brain metastases
chevron_leftchevron_right
Catalog
Dataset information
Contributors
Accessions
Dataset information
Summary:
Spatial RNA-seq were successfully constructed through expression profiling of a total of 18,694 genes in non-small cell lung cancer (NSCLC) cases with paired brain metastases.Overall design:
In the study presented here, 35 cases from a well-defined cohort of 44 NSCLC cases with paired brain metastases was used to acquire expression profiles of a total of 18,694 unique genes.Technology:
GeoMx DSP
Platform:
NextSeq 550 (Homo sapiens)
Species:
Homo sapiens(hg38)
Tissues:
Lung
Cell types:
Metastatic lung cancer in a lymph node, tumor immune microenviroment in the metastatic brain, tumor immune microenviroment in the primary lung cancer, Metastatic lung cancer in the brain, primary lung cancer, non-tumor brain, tumor brain microenviroment in metastatic brain
Disease:
Non-small cell lung cancerCitation:
Zhang, Qi et al. “The spatial transcriptomic landscape of non-small cell lung cancer brain metastasis.” Nature communications vol. 13,1 5983. 10 Oct. 2022, doi:10.1038/s41467-022-33365-ySubmission date: 2022-04-10Update date: 2022-10-12
Sample number: 120
Contributors
Abdo, Rober
Accessions
GEO Series Accessions:
GSE200563