Spatiotemporal transcriptomes of orchid flowers
Dataset ID: STDS0000149
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PMID:36095130
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8,253 Spots
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28,903 Genes
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Dataset information
Contributors
Accessions
Dataset information
Summary:
We performed spatial transcriptome sequencing of orchid to provide spatial cell atlas of floral organogenesis.
Overall design:
Phalaenopsis Big Chili flowers at early developing stages sequenced on 10X Visium platform
Technology:
10x Visium
Platform:
Illumina NovaSeq 6000 (Phalaenopsis aphrodite)
Species:
Phalaenopsis aphrodite(ASM301322v1)
Tissues:
Flower
Organ parts:
Sagittal section
Development stage:
8 days after budding
Citation:
Liu, Chang et al. “A spatiotemporal atlas of organogenesis in the development of orchid flowers.” Nucleic acids research vol. 50,17 (2022): 9724-9737. doi:10.1093/nar/gkac773
Submission date: 2022-03-08Update date: 2022-10-24
Sample number: 3Section number: 3
Contributors
Liu, Chang; Leng, Jing; Li, Yonglong; Ge, Tingting; Li, Jinglong; Chen, Yamao; Guo, Chunce; Qi, Ji
Accessions
GEO Series Accessions: GSE198128