Human Gut (9.9M)

  • Data
  •   Gene Catalog Reference

      Gene profile, taxonomic profile, KO profile

  • Summary
  • #ORFs% Complete ORFsTotal length (bp)Average length (bp)N50 (bp)N90 (bp)Max lengthMin length% annotated on Phylum level% annotated on Genus level% annotated on KO% annotated on eggNOG
    9,879,89657.74%7,436,156,0557531,03538488,23010021.3%16.3%42.1%60.4%

    * ORFs: open reading frame
    * N50: it is the length for which the collection of all contigs of that length or longer contains at least half of the total of the lengths of the contigs
    * N90: it is the length for which the collection of all contigs of that length or longer contains at least 90% of the total of the lengths of the contigs
    * KO: KEGG orthologue group
    * eggNOG (evolutionary genealogy of genes: Non-supervised Orthologous Groups)
    See our paper for details.

    Gene length

    Number of genes assembled from only one cohort or multiple cohorts

    Phylum composition

    Genus composition

    Distribution among eggNOG secondary functional categories

    Distribution among KEGG secondary functional categories

    Reference

    Li, J. et al. An integrated catalog of reference genes in the human gut microbiome. Nat. Biotechnol. (2014).