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1K Insect Transcriptome 16336 12

2019-07-24

Creator: wanglina1@genomics.cn

Updater: chenfengzhen@genomics.cn

The 1KITE (1K Insect Transcriptome Evolution) project aims to study the transcriptomes (that is the entirety of expressed genes) of more than 1,000 insect species encompassing all recognized insect orders. For each species, so-called ESTs (Expressed Sequence Tags) will be produced using next generation sequencing techniques (NGS). Sequencing and sequence assembly have been completed for more than 1,200 species. Transcriptomic data from 1KITE shed new light on the evolution of insects.

PThe 1KITE project: evolution of insects

  Source:  CNGB Project  ( ID CNPhis0002893 )

Project name: -

Description: Insects are one of the most species-rich groups of metazoan organisms. They play a pivotal role in most non-marine ecosystems and many insect species are of enormous economical and medical importance. Unraveling the evolution of insects is essential for understanding how life in terrestrial and limnic environments evolved. The 1KITE (1K Insect Transcriptome Evolution) project aims to study the transcriptomes (that is the entirety of expressed genes) of 1,000 insect species encompassing all recognized insect orders. For each species, so-called ESTs (Expressed Sequence Tags) will be produced using next generation sequencing techniques (NGS). The expected data will allow inferring for the first time a robust phylogenetic backbone tree of insects. Furthermore, the project includes the development of new software for data quality assessment and analysis.

Data type : -

Sample scope: -

Relevance: Evolution

Submitter: -

Organization: Zoologisches Forschungsmuseum Alexander Koenig (ZFMK)
The 1KITE consortium
BGI

Accession in other database: PRJNA183205

Literature(s):

  1. Misof B; Liu S; Meusemann K et al. Phylogenomics resolves the timing and pattern of insect evolution. Science,2014/11/07;346(6210):763-7. PMID: 25378627
  2. Kawahara AY; Plotkin D; Espeland M et al. Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths. Proc Natl Acad Sci U S A,2019/11/05;116(45):22657-22663. PMID: 31636187

Release date: -

Updated: 2012-12-07

DOI: 10.26036/CNPhis0002893

Statistic:

  • Assembly: -
  • Sample: 103
  • Experiments: 103
  • Runs: 103

Data size : -

https://db.cngb.org
https://db.cngb.org/data_access/

P-

  Source:  CNGB Project  ( ID CNP0000513 )

Project name: -

Description: -

Data type : -

Sample scope: -

Relevance: -

Submitter: -

Organization: -

Accession in other database: -

Literature(s): -

Release date: -

Updated: -

DOI: -

Statistic:

  • Assembly: -
  • Sample: -
  • Experiments: -
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Data size : -

Comment: genomes of the Fall armyworm
https://db.cngb.org
https://db.cngb.org/data_access/

P-

  Source:  CNGB Project  ( ID CNP0000467 )

Project name: -

Description: -

Data type : -

Sample scope: -

Relevance: -

Submitter: -

Organization: -

Accession in other database: -

Literature(s): -

Release date: -

Updated: -

DOI: -

Statistic:

  • Assembly: -
  • Sample: -
  • Experiments: -
  • Runs: -

Data size : -

Comment: Angiostrongylus cantonensis Genome sequencing and assembly
https://db.cngb.org
https://db.cngb.org/data_access/

Other details

Referenced accession ID :

The dataset references CNPhis0002893, CNP0000513, CNP0000467, thanks to the submitters and researchers of the data.

How to site the dataset :

To respect the results of the dataset creator and updater, it is recommended to reference the dataset accession ID in the article :

The dataset that support this study is DATAXXXXXX which was created in CNGBdb(https://db.cngb.org)

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