1.  Home
  2. Datamart
  3. PMGR Vertebrates

Dataset navigation

      Tree view

      The total number of samples is counted. One row is a run in the right Run data table.

        ID:DATAani19
        New datasetUpdated dataset

        PMGR Vertebrates 5439 7

        2020-11-28

        Creator: sunshuai@genomics.cn

        Public Marine Genome Resources of Vertebrates (PMGR Vertebrates) aims to be the world's most comprehensively specialized database of vertebrates living in the marine environment. The ocean occupies 71% of the earth's surface area, more than 25% of the global species. The ocean is the origin of life and has extremely high biodiversity. However, there has been no specialized genomic database for marine organisms. When we (BGI-Qingdao) reviewed the marine omics on our white paper, which was published every two years, the genomics resources of marine organisms were very fragmented and incomplete. This data set is maintained by BGI-Qingdao, including the newly assembled genomes by ourselves and the published genomes from other public databases. We systematically evaluated the assembly quality, annotated the genes for species that do not have genetic annotations, and performed an overview analysis in our white paper on marine resources. In short, we provided comprehensive, artificially corrected, convenient, direct, and convenient genome resources to the researchers in the field of marine biological resources.

        marine organism genomes vertebrates

        A-

          Source:  GenBank Assembly  ( ID GCA_901709675.1 )

        Description: -

        Molecule type: -

        Submitter: -

        Synonyms: -

        Assembly type: -

        Assembly level: -

        Assembly method: -

        Genome representation: -

        Excluded from RefSeq: -

        RefSeq category: -

        GenBank assembly accession: -

        RefSeq assembly accession: -

        RefSeq assembly and GenBank assembly identical: -

        WGS Project: -

        Genome coverage: -

        Accession in other database: -

        Sequencing technology: -

        Release date: -

        Updated: -

        Literature(s): -

        Assembly data:

        Project IDSample IDAssembly accessionOrganismMolecule typeGenome representationFile
        https://db.cngb.org
        https://db.cngb.org/data_access/

        A-

          Source:  RefSeq Assembly  ( ID GCF_900747795.1 )

        Description: -

        Molecule type: -

        Submitter: -

        Synonyms: -

        Assembly type: -

        Assembly level: -

        Assembly method: -

        Genome representation: -

        Excluded from RefSeq: -

        RefSeq category: -

        GenBank assembly accession: -

        RefSeq assembly accession: -

        RefSeq assembly and GenBank assembly identical: -

        WGS Project: -

        Genome coverage: -

        Accession in other database: -

        Sequencing technology: -

        Release date: -

        Updated: -

        Literature(s): -

        Assembly data:

        Project IDSample IDAssembly accessionOrganismMolecule typeGenome representationFile
        https://db.cngb.org
        https://db.cngb.org/data_access/

        A-

          Source:  RefSeq Assembly  ( ID GCF_900634795.2 )

        Description: -

        Molecule type: -

        Submitter: -

        Synonyms: -

        Assembly type: -

        Assembly level: -

        Assembly method: -

        Genome representation: -

        Excluded from RefSeq: -

        RefSeq category: -

        GenBank assembly accession: -

        RefSeq assembly accession: -

        RefSeq assembly and GenBank assembly identical: -

        WGS Project: -

        Genome coverage: -

        Accession in other database: -

        Sequencing technology: -

        Release date: -

        Updated: -

        Literature(s): -

        Assembly data:

        Project IDSample IDAssembly accessionOrganismMolecule typeGenome representationFile
        https://db.cngb.org
        https://db.cngb.org/data_access/

        Please enter a positive integer less than or equal to the total number of pages

        Other details

        Referenced accession ID :

        The dataset references GCA_901709675.1, GCF_900747795.1, GCF_900634795.2, GCA_900610375.1, GCA_900607315.1, GCA_900490495.1, GCA_900408965.1, GCA_900327885.1, GCA_900324485.2, GCF_900246225.1, GCA_900092035.1, GCA_007896545.1, GCF_007364275.1, GCA_005870065.1, GCA_005281545.1, GCA_004916995.1, GCA_004358465.1, GCA_004355925.1, GCA_004348285.1, GCA_004026145.1, GCA_004006655.2, GCA_003597225.1, GCA_003416845.1, GCA_003412525.1, GCA_003331165.1, GCA_003047355.2, GCA_002994505.1, GCF_002910315.2, GCA_002217815.1, GCA_001904815.2, GCF_001858045.2, GCA_001698575.1, GCA_001593715.1, GCF_001465895.1, GCF_000972845.2, GCA_000751415.1, GCA_000689215.1, GCF_000372685.2, GCF_000238955.4, GCA_000233375.4, GCF_000002035.6, GCF_902150065.1, GCF_902148855.1, GCF_902148845.1, GCF_901001165.1, GCF_901000725.2, GCF_900964775.1, GCF_900963305.1, GCF_900880675.1, GCF_900700375.1, GCF_900634775.1, GCF_900634625.1, GCF_900634415.1, GCF_006149115.1, GCF_004634155.1, GCF_004354835.1, GCF_003724035.1, GCF_003671635.1, GCF_003368295.1, GCF_002922805.1, GCF_002872995.1, GCF_002872115.1, GCF_002260705.1, GCF_002234675.1, GCF_002163495.1, GCF_002021735.1, GCF_001891065.1, GCF_001682695.1, GCF_001640805.1, GCF_001515645.1, GCF_001515605.1, GCF_001444195.1, GCF_001266775.1, GCF_000951615.1, GCF_000826765.1, GCF_000788275.1, GCF_000633615.1, GCF_000485575.1, GCF_000242695.1, GCF_000239415.1, GCF_000239395.1, GCF_000239375.1, GCA_004120215.1, GCA_003999625.1, GCA_003731715.1, GCA_003711565.2, GCA_003186165.1, GCA_003097735.1, GCA_902685375.1, GCF_902500255.1, GCF_900700415.1, GCA_007927625.1, GCF_002775205.1, GCF_902362185.1, GCF_900324465.2, GCA_004786185.1, GCF_008692095.1, GCA_004119915.1, GCA_900536245.1, GCA_011397275.1, GCA_009819705.1, GCF_009769545.1, GCA_005784505.1, GCF_001952655.1, GCA_010909765.1, GCF_000165045.1, GCA_004010195.1, GCA_003427335.1, GCA_900186335.2, GCA_009936485.1, GCA_000466285.1, GCA_010993605.1, GCA_010883035.1, GCA_010277075.1, GCA_010277015.1, GCA_009764475.1, GCA_010882115.1, GCA_011952105.1, GCA_011823955.1, GCA_011397635.1, GCA_011952085.1, GCA_011952075.1, GCA_011952095.1, GCA_010014945.1, GCA_011763505.1, GCA_012411365.1, GCF_902827175.1, GCA_902827135.1, GCA_902810495.1, GCA_901007915.1, GCF_902827165.1, GCA_902810505.1, GCA_010645085.1, GCA_013133815.1, GCA_903798035.1, GCA_903798125.1, GCA_903798115.1, GCA_903798195.1, GCA_903798205.1, GCA_903131615.1, GCF_013103735.1, GCF_013339905.1, GCA_013368585.1, GCA_013363375.1, GCA_013375575.1, GCF_902167405.1, GCF_001515625.1, GCA_004006655.2, GCA_013436515.1, GCA_013358685.1, GCA_900302675.1, GCA_900302635.1, GCA_009756495.1, GCA_009756435.1, GCA_900302755.1, GCA_004028445.1, GCA_003987875.1, GCA_013621035.1, GCA_901007785.1, GCA_014132575.1, GCA_900302695.1, GCA_013461565.1, GCA_000238235.1, GCA_009660295.1, GCA_900302535.1, GCA_014183145.1, GCA_900302575.1, GCA_007224835.1, GCA_901007775.1, GCA_900302575.1, GCA_012976165.1, GCA_900312595.1, GCA_900303255.1, GCA_000150855.1, GCA_900302325.1, GCA_900302295.1, GCA_005024645.1, GCA_900302655.1, GCA_004335365.1, GCA_900302685.1, GCA_900323305.1, GCA_001910805.2, GCA_005408345.1, GCA_003399555.1, GCA_011419295.1, GCF_000523025.1, GCA_900302365.1, GCA_900303235.1, GCA_900302515.1, GCF_900080235.1, GCA_901007895.1, GCA_900312615.1, GCA_900323375.1, GCA_900312625.1, GCA_004335335.1, GCA_002120245.1, GCA_900303215.1, GCA_900660455.1, GCA_902204185.2, GCA_012026605.1, GCA_901111305.1, GCA_000787105.1, GCA_900312585.1, GCA_900660355.1, GCA_900303225.1, GCA_900302345.1, GCA_900303205.1, GCA_900302425.1, GCF_003665695.1, GCA_900302595.1, GCA_900312955.1, GCF_001443325.1, GCA_900660315.1, GCA_000787555.1, GCF_002109545.1, GCA_003317085.1, GCA_002592385.1, GCF_002776465.1, GCA_901007745.1, GCA_900323335.1, GCF_000239375.1, GCA_001403095.1, GCA_900302335.1, GCA_000180735.1, GCA_000475235.3, GCA_900302375.1, GCA_900302555.1, GCA_000700825.1, GCA_900291075.1, GCA_900660295.1, GCA_000475215.1, GCA_900302275.1, GCA_003427355.1, GCA_003347165.1, GCA_901111315.1, GCA_000150875.1, GCA_901007805.1, GCA_900302585.1, GCA_900302625.1, GCA_003054885.1, GCA_901111295.1, GCA_003573665.1, GCA_900302385.1, GCA_900323315.1, GCA_900683385.1, GCA_900312565.1, GCF_001642345.1, GCA_903364295.1, GCA_007844225.1, GCA_900302395.1, GCA_900312555.1, GCA_001455555.1, GCA_901007705.1, GCA_003231725.1, GCA_901007715.1, GCA_004764525.1, GCA_900303245.1, GCA_900312635.1, GCA_900312575.1, GCA_000499045.1, GCA_901007905.1, GCF_001443285.1, GCA_903064625.1, GCA_000325985.2, GCA_900302355.1, GCA_001606085.1, GCA_900660325.1, GCA_900302405.1, GCA_900312945.1, GCA_900323325.1, GCF_000735185.1, GCA_011763525.1, GCA_000695075.1, GCA_900312545.1, GCA_000787155.1, GCA_900323365.1, GCA_900302305.1, GCA_900499035.1, GCA_900302285.1, GCA_903798145.1, GCA_001910765.2, GCF_000690725.1, GCA_012026655.1, GCA_001910785.2, GCA_000150935.1, GCA_000418415.1, GCA_900303275.1, GCA_003610055.1, GCA_901007665.1, GCA_002895965.1, GCA_900302605.1, GCA_900302315.1, GCA_900302415.1, GCA_010119295.1, GCA_900302745.1, GCA_900303265.1, GCA_000787095.1, GCA_004335315.1, GCA_900323295.1, GCA_900323355.1, GCA_000697985.1, GCA_004193235.1, GCA_007210695.1, GCA_901007825.1, GCA_900302545.1, GCA_004124795.1, GCA_003651195.1, GCF_000732505.1, GCA_900302615.1, GCA_900312935.1, GCA_002897255.1, GCA_900323345.1, GCA_000150895.1, GCA_901007815.1, CNA0003582, CNA0004138, CNA0004139, CNA0004140, CNA0004142, CNA0004143, CNA0004144, CNA0004145, CNA0004146, GCA_002915635.2, GCF_001663975.1, GCF_000004195.4, GCA_900303285.1, GCA_002284835.2, GCA_009802015.1, GCA_004786255.1, GCA_009801035.1, GCA_011038615.1, GCF_000935625.1, GCF_901001135.1, GCF_902459505.1, GCF_901765095.1, GCF_011800145.1, GCF_011762595.1, GCA_011754075.1, GCA_009873245.2, GCA_009917745.1, GCF_008692025.1, GCA_007760645.1, GCF_006547405.1, GCF_005190385.1, GCA_004364475.1, GCA_004363495.1, GCA_004363415.1, GCA_004363455.1, GCA_004363705.1, GCA_004363515.1, GCF_002837175.2, GCA_004329385.1, GCF_004348235.1, GCA_900642305.1, GCA_004027085.1, GCA_004023865.1, GCF_004028035.1, GCF_003676395.1, GCF_003265705.1, GCA_003227395.1, GCF_003031525.1, GCF_003031525.1, GCF_002201575.1, GCA_000978805.1, GCF_000493695.1, GCF_000442215.1, GCF_000349705.1, GCF_000331955.2, GCF_000321225.1, GCF_000243295.1, GCA_000385615.1, GCA_007922185.1, GCA_003597395.1, GCA_007922165.1, GCA_011386835.1, GCA_004028625.2, GCA_003846335.1, GCA_007922305.1, GCA_006547105.1, GCA_007922225.1, GCA_002896415.1, GCA_007399415.1, GCA_007922155.1, GCA_000230535.1, GCA_007922175.1, GCA_003942145.1, GCA_007922195.1, thanks to the submitters and researchers of the data.

        How to site the dataset :

        To respect the results of the dataset creator and updater, it is recommended to reference the dataset accession ID in the article ：

        The dataset that support this study is DATAXXXXXX which was created in CNGBdb（https://db.cngb.org）

         Copy

        Updated datasetNew dataset

        Associated dataset