Deep Sequencing Leads to the Identification of Eukaryotic Translation Initiation Factor 5A as a Key Element in Rsv1-Mediated Lethal Systemic Hypersensitive Response to Soybean Mosaic Virus Infection in Soybean
Source: NCBI BioProject (ID PRJNA311571)
Source: NCBI BioProject (ID PRJNA311571)
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Project name: Glycine max
Description: We reported a genome-wide investigation to gain insight into the molecular signaling pathway involved in SMV G7 provoking Rsv1-mediated LSHR based on sRNA-seq, degradome-seq and transcriptome-seq analysis.Overall design: mRNA, miRNAs and degradome profiles of Rsv1-genotype soybean (PI96983) after 14 days post-inoculation (dpi) by SMV-L (avirulent strain), SMV-G7 (virulent strain) and Mock (control) were generated by deep sequencing, pooled from three biological replicates (5 plants in each replicate) for each treatment, using Illumina Miseq.
Data type: Other
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Agriculture and Agri-Food Canada
Literatures
- PMID: 27019403
Last updated: 2016-02-10