Expression comparison of GAS M3 strains MGAS315 & MGAS9887 in exponential growth
Source: NCBI BioProject (ID PRJNA94229)
Source: NCBI BioProject (ID PRJNA94229)
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Project name: Streptococcus sp. 'group A'
Description: Epidemiological data indicate that strains MGAS315 and MGAS9887 differ significantly in their capacity to cause necrotizing fasciitis infections. To probe the hypothesis that this difference was associated with differences in gene expression, an expression MA comparison of the strains in exponential phase growth in rich media was conducted.Keywords: strain comparisonOverall design: For statistical robustness in comparing the strains, total RNA was isolated from 3 independent growths (3 biological replicates), split into 2 samples (2 technical replicates) for a total of 6 replicates per strain, and 12 total samples for the investigation.
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Medical
Organization: Infectious Disease Research, Pathology and Genomic Medicine, Houston Methodist Research Institute
Literatures
- PMID: 16636287
Release date: 2006-02-28
Last updated: 2006-01-03