genome sequencing of Lactiplantibacillus plantarum LP7 and its transcriptome profiles under nitrite stress
Source: NCBI BioProject (ID PRJNA853126)
Source: NCBI BioProject (ID PRJNA853126)
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Project name: Lactiplantibacillus plantarum strain:LP7
Description: We isolated bacteria resistant to nitrite stress from human feces and performed whole-genome sequencing to identify them as Lactiplantibacillus plantarum LP7 (LP7). To identify the gene related to nitrite stress in LP7, we performed RNA-seq of LP7 with L. plantarum ATCC14917 (ATCC14917) as a reference strain. Transcriptome profiles were obtained using illumina NovaSeq. RNA samples were prepared in biologically independent duplicates with/without nitrite in LP7 and in ATCC14917.
Data type: genome sequencing and assembly
Sample scope: Multiisolate
Organization: Yonsei University College of Medicine
Last updated: 2022-06-27