Comparative analysis of gene expression in tomato roots during mild and severe potato spindle tuber viroid infection. [roots RNA-seq]
Source: NCBI BioProject (ID PRJNA515609)
Source: NCBI BioProject (ID PRJNA515609)
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Project name: Comparative analysis of gene expression in tomato roots during mild and severe potato spindle tuber viroid infection. [roots RNA-seq]
Description: Comparative analysis of gene expression in tomato roots during mild and severe potato spindle tuber viroid infection.Overall design: Mild (PSTVd-M) and severe (PSTVd-S23) strains were used to inoculate Solanum lycopersicum cv Rutgers plants. Root samples were collected at 17 days post inoculation (dpi), i.e. at early stage of symptoms. Three independent biological replicates of PSTVd-M, PSTVd-S23 and pUC9 were analised. Totally 18 samples of RNA were analysed.Please note that the *Gene_counts* file was updated on Sep 22, 2021.
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Institute of Biochemistry and Biophysics, PAS
Literatures
- PMID: 31671783
Last updated: 2019-01-17