Genome-wide microRNA screening in Nile tilapia reveals pervasive transcription of isomiRs, sex-biased arm switching and increasing complexity of expression throughout development
Source: NCBI BioProject (ID PRJNA399148)
Source: NCBI BioProject (ID PRJNA399148)
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Project name: Oreochromis niloticus
Description: The elucidation of microRNA function and evolution depends on the identification and characterization of miRNA repertoire of strategic organisms, as the fast evolving cichlid fishes. Using RNA-seq and comparative genomics we carried out an in-depth report of miRNAs in Nile tilapia (Oreochromis niloticus). Our results enlarge vertebrate
miRNAs collection and reveal a notable differential expression of miRNAs arms and isoforms influenced by sex and developmental life stage, providing a better picture of the evolutionary and spatiotemporal dynamics of miRNAs.Overall design: Discovery and evolutionary analysis of microRNAs
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Other
Organization: Laboratory Genomics and Molecular Evolution, Genetics, Sao Paulo State University
Literatures
- PMID: 32707870
Last updated: 2017-08-21