RNA sequencing of Hordeum vulgare near isogenic lines
Source: NCBI BioProject (ID PRJNA338263)
Source: NCBI BioProject (ID PRJNA338263)
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Project name: Hordeum vulgare
Description: NILs containing five parental lines, three wild barley genotypes ssp. spontaneum: HID 4 (A), Iraq; HID 64 (B), Turkey; and HID 369 (C), Israel, one ssp. agriocrithon: HID 382(D)) and cv. Morex (ssp. vulgare, USA).Purpose: Variant calling to identifie markers associated with a awn length QTL on the distal part of chromosome 7HLOverall design: Two NILs differing in awn length were sequenced, one having an introgression from HID382 at position 132.01 – 134.21 cM (POPSEQ map) (RD) and the other from Morex (RM).
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Genome Centre, Max Planck Institute for Plant Breeding Research
Literatures
- PMID: 27734096
Last updated: 2016-08-08