In Silico transcriptional regulatory networks during tomato fruit ripening
Source: NCBI BioProject (ID PRJNA313357)
Source: NCBI BioProject (ID PRJNA313357)
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Project name: Solanum lycopersicum
Description: The aim of this study is to generate gene regulatory networks by analyzing Affymetrix GeneChip expression datasets from four different stages of tomato fruit ripening, Breaker (Br), Turning (Tu), Pink (Pk) and Red Ripe (RR) with the LeMoNe algorithm in order to identify co expression modules and their putative regulatory TFs.Overall design: 9 samples were analyzed in total, mainly 2 replicates for each developmental stage.
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Horticultural Genetics and Biotechnology, Mediterranean Agronomic Institute of Chania (MAICh)
Literatures
- PMID: 27625653
Last updated: 2016-02-27