Enterococcus faecium strain:Case1VSE Raw sequence reads
Source: NCBI BioProject (ID PRJNA306646)

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Project name: Enterococcus faecium strain:Case1VSE
Description: We report an outbreak of vancomycin susceptible vanA+ enterococci able to escape phenotypic detection by current guidelines, found by two initial cases of in vivo switching into vancomycin resistant Enterococcus faecium (VREfm) in vancomycin-treated patients and a subsequent screening initiative. Six isolates were sequenced by Illumina MiSeq, of which two vancomycin susceptible vanA+ isolates from infected cases and two vancomycin resistant isolates stemming from the same two patients after vancomycin treatment. We also provide two vancomycin susceptible isolates from a subsequent screening initiative.
Data type: raw sequence reads
Sample scope: Multiisolate
Relevance: Medical
Organization: University of Tromso
Last updated: 2015-12-21
Statistics: 6 samples; 6 experiments; 11 runs