Coilia nasus Transcriptome or Gene expression
Source: NCBI BioProject (ID PRJNA232802)
Source: NCBI BioProject (ID PRJNA232802)
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Project name: Coilia nasus
Description: Transcripts were assembled using the program SOAPdenovo (v1.04) after the removal of the adapter sequences. Paired-end reads areused again for gap filling of scaffolds to get sequences with least Ns and cannot be extended on either end. Blastx alignment (e-value < 0.00001) between Unigenes and protein databases like nr, Swiss-Prot, KEGG and COG is performed, and the best aligning results are used to decide sequence direction of Unigenes.
Data type: transcriptome
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Freshwater Fisheries Research Center (FFRC) of Chinese Academy of Fishery Sciences (CAFS)
Last updated: 2014-01-01