NGS and Transcriptome Analyses using AZ customized microarray on Flower Abscission zone in Tomato (Solanum lycopersicum) Plants
Source: NCBI BioProject (ID PRJNA193527)
Source: NCBI BioProject (ID PRJNA193527)
0 0
Project name: Solanum lycopersicum
Description: To extend our previous knowledge from our gene expression studies on Flower Abscission zone using Affymetrix microarray chip we have employed whole transcriptome analysis by NGS as a discovery platform to identify and add the transcripts to pre-existing database. We designed the Customized AZ Microarray chip with the transcripts obtained from NGS (includes novel transcripts), pre existing Agilent probes, and some additional transcripts from previous databases. The flower AZ tissue was sampled at five time points (0, 2, 4, 8, and 14 h), following flower removal and analyzed for their gene expression profiles using the customized AZ microarray.Overall design: Solanum lycopersicum Custom Microarray 4x180K Array designed by Genotypic Technology Private Limited. (AMADID:043310)
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Agricultural
Organization: Dr. Shimon Meir Lab, Post Harvest Technology, Agricultural Research Organisation, The volcani center, Israel
Last updated: 2013-03-20