Comparative analysis of bacterial transcriptome using DNA microarray and next generation sequencing technologies
Source: NCBI BioProject (ID PRJNA152097)

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Project name: Lactiplantibacillus plantarum
Description: Validation of Lactobacillus plantarum WCFS1 transcriptome profile using RNA sequencing (direct cDNA sequencing and 3'-UTR sequencing) in comparison with DNA microarray as a reference platform.Overall design: Transcriptome analysis was performed on total RNA and enriched mRNA of L. plantarum WCFS1 grown in CDM or MRS media. Samples were hybridized in a loop design, hybridizing each sample twice, once for each dyeThis Series represents the DNA microarray experiments only.
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: Industrial
Organization: NIZO food research
Literatures
  1. PMID: 22492454
Release date: 2012-07-10
Last updated: 2012-02-13