Project name: Glycine max

Description: Experimental design: 2 genotypes: PI- (resistant USDA Plant Introduction (PI459025B) line containing SBR Rpp4 resistance gene) & Cultivar Williams that does not have a known SBR resistance gene 2 treatments: Soybean rust (Phakopsora pachyrhizi) isolate Hawaii 94-1 & mock infection 3 replications 6 time points: 12, 24, 72, 144, 216 and 288 hours after inoculation TOTAL: 72 Affymetrix GeneChip(R) Soybean Genome Arrays Mock treatment: 0.01% Tween 20 Hawaii 94-1 treatment: 500,000 spores per ml in 0.01% Tween 20 ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Steve Whitham. The equivalent experiment is GM37 at PLEXdb.]Overall design: genotype: Williams - pathogen inoculation: Mock - time: 12 hai(3-replications); genotype: Williams - pathogen inoculation: Mock - time: 24 hai(3-replications); genotype: Williams - pathogen inoculation: Mock - time: 72 hai(3-replications); genotype: Williams - pathogen inoculation: Mock - time: 144 hai(3-replications); genotype: Williams - pathogen inoculation: Mock - time: 216 hai(3-replications); genotype: Williams - pathogen inoculation: Mock - time: 288 hai(3-replications); genotype: Williams - pathogen inoculation: Hawaii 94-1 - time: 12 hai(3-replications); genotype: Williams - pathogen inoculation: Hawaii 94-1 - time: 24 hai(3-replications); genotype: Williams - pathogen inoculation: Hawaii 94-1 - time: 72 hai(3-replications); genotype: Williams - pathogen inoculation: Hawaii 94-1 - time: 144 hai(3-replications); genotype: Williams - pathogen inoculation: Hawaii 94-1 - time: 216 hai(3-replications); genotype: Williams - pathogen inoculation: Hawaii 94-1 - time: 288 hai(3-replications); genotype: PI459025B - pathogen inoculation: Mock - time: 12 hai(3-replications); genotype: PI459025B - pathogen inoculation: Mock - time: 24 hai(3-replications); genotype: PI459025B - pathogen inoculation: Mock - time: 72 hai(3-replications); genotype: PI459025B - pathogen inoculation: Mock - time: 144 hai(3-replications); genotype: PI459025B - pathogen inoculation: Mock - time: 216 hai(3-replications); genotype: PI459025B - pathogen inoculation: Mock - time: 288 hai(3-replications); genotype: PI459025B - pathogen inoculation: Hawaii 94-1 - time: 12 hai(3-replications); genotype: PI459025B - pathogen inoculation: Hawaii 94-1 - time: 24 hai(3-replications); genotype: PI459025B - pathogen inoculation: Hawaii 94-1 - time: 72 hai(3-replications); genotype: PI459025B - pathogen inoculation: Hawaii 94-1 - time: 144 hai(3-replications); genotype: PI459025B - pathogen inoculation: Hawaii 94-1 - time: 216 hai(3-replications); genotype: PI459025B - pathogen inoculation: Hawaii 94-1 - time: 288 hai(3-replications)

Data type: Transcriptome or Gene expression

Sample scope: Multiisolate

Relevance: Agricultural

Last updated: 2011-06-03