Transcript Profiling of Soybean Seed Compartments Using Laser Capture Microdissection Coupled With RNA-Seq - Project - Data resources

PRJNA140079

Transcript Profiling of Soybean Seed Compartments Using Laser Capture Microdissection Coupled With RNA-Seq
Source: NCBI BioProject (ID PRJNA140079)

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Project name: Glycine max

Description: We used laser capture microdissection (LCM) to capture soybean seed compartments and profiled the transcriptomes of several compartments using next-generation sequencing. We profiled the transcriptomes of the embryo-proper and the suspensor region from globular stage embryos and the seed coat parenchyma layer of early maturation stage seeds using the Illumina GAIIx system.Overall design: Illumina sequencing of transcripts from laser-captured embryo proper and suspensor of globular stage embryo and seed coat parenchyma layer of the early maturation stage seed.

Data type: Transcriptome or Gene expression

Sample scope: Multiisolate

Relevance: Agricultural

Organization: Molecular, Cell and Developmental Biology, University of California, Los Angeles

Release date: 2011-05-10

Last updated: 2011-05-09

Statistics: 3 samples; 3 experiments; 10 runs