Genomic DNA mixture series in Allele Specific Expression study
Source: NCBI BioProject (ID PRJNA122907)
Source: NCBI BioProject (ID PRJNA122907)
0 0
Project name: Arabidopsis thaliana
Description: Genomic DNA of Col-0, Van-0 and their mixture at different proportion were labeled using Bioprime randon labeling kit. A total of 16ug labelled products were hybridized to AtSNPtile1.This experiment is to test whether the log allele intensity ratio efficiently detects the allelic variation within targets.Overall design: Templates include four Col genomic DNA replicates, four Van genomic DNA replicates, three Col and Van 1:1 mixture replicates, and one of each 1:2, 1:3, 1:5, 2:1, 3:1, 5:1 Col and Van mixture. Single chanel. Total 17 samples.
Data type: Variation
Sample scope: Multiisolate
Relevance: ModelOrganism
Organization: Borevitz, Ecology and Evolution, University of Chicago
Literatures
- PMID: 19474198
Release date: 2009-08-15
Last updated: 2009-06-08