Soybean Field Multi-omics Analysis (Transcriptome Part)
Source: NCBI BioProject (ID PRJDB11138)

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Project name: Glycine max strain:Enrei
Description: The plant root-associated environments such as the rhizosphere, rhizoplane, and endosphere are different from the outer soil region (bulk soil). They establish characteristic conditions including microbiota, metabolites, and minerals, and they can directly affect plant growth and development. However, comprehensive insights into those characteristic environments, especially the rhizosphere, and molecular mechanisms of their formation are not well understood. In the present study, we investigated the spatiotemporal dynamics of the root-associated environment in actual field conditions by multi-omics analyses (mineral, microbiome, and transcriptome) of soybean plants. Our field multi-omics analysis suggests a rhizosphere-specific close association between the microbiota and mineral environment.
Data type: Transcriptome or Gene expression
Sample scope: Monoisolate
Relevance: Agricultural
Organization: Systems Bioinformatics, Graduate School of Information Sciences, Tohoku Medical Megabank Organization, Tohoku University
Release date: 2023-01-24
Last updated: 2021-01-24
Statistics: 80 samples; 80 experiments; 80 runs