Genome of a novel Sediminibacterium discovered in association with two species of freshwater cyanobacteria from streams in Southern California.
G3 (Bethesda), 2022/07/06;12(7)
Sethuraman A[1, 2], Stancheva R[1], Sanders C[1], Caceres L[1, 3, 4], Castro D[1], Hausknecht-Buss H[1, 5], Henry S[1, 5], Johansen H[1, 6], Kasler A[1], Lastor S[1, 7], Massaro I[1], Mekuria I[1], Moron-Solano A[1, 8], Read N[1], Vengerova G[1, 9], Zhang A[1, 10], Zhang X[1], Read B[1]
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PMID: 35639673DOI: 10.1093/g3journal/jkac123
Impact factor: 3.542
Abstract
Here, we report the discovery of a novel Sediminibacterium sequenced from laboratory cultures of freshwater stream cyanobacteria from sites in Southern California, grown in BG11 medium. Our genome-wide analyses reveal a highly contiguous and complete genome (97% BUSCO) that is placed within sediminibacterial clades in phylogenomic analyses. Functional annotation indicates the presence of genes that could be involved in mutualistic/commensal relationship with associated cyanobacterial hosts.
Keywords: annotation; genome assembly; phylogenomics; sediminibacteria
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