Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor.
Genom Data, 2017/6;12:49-51.
O-Thong S[1], Khongkliang P[2], Mamimin C[2], Singkhala A[2], Prasertsan P[3], Birkeland NK[4]
Affiliations
PMID: 28337413DOI: 10.1016/j.gdata.2017.02.012
Abstract
Thermoanaerobacterium sp. strain PSU-2 was isolated from thermophilic hydrogen producing reactor and subjected to draft genome sequencing on 454 pyrosequencing and annotated on RAST. The draft genome sequence of strain PSU-2 contains 2,552,497 bases with an estimated G + C content of 35.2%, 2555 CDS, 8 rRNAs and 57 tRNAs. The strain had a number of genes responsible for carbohydrates metabolic, amino acids and derivatives, and protein metabolism of 17.7%, 14.39% and 9.81%, respectively. Strain PSU-2 also had gene responsible for hydrogen biosynthesis as well as the genes related to Ni-Fe hydrogenase. Comparative genomic analysis indicates strain PSU-2 shares about 94% genome sequence similarity with Thermoanaerobacterium xylanolyticum LX-11. The nucleotide sequence of this draft genome was deposited into DDBJ/ENA/GenBank under the accession MSQD00000000.
Keywords: Hydrogen producing bacteria; Thermoanaerobacterium sp.; Thermophile; Whole genome sequencing
More resources
Full text:
Europe PubMed Central; PubMed Central
EndNote: Download