Phylogenesis and Clinical Aspects of Pandemic 2009 Influenza A (H1N1) Virus Infection.

Open Virol J, 2011;5:22-6.

Ciccozzi M[1], Babakir-Mina M, Lo Presti A, Marcuccilli F, Perno CF, Ciotti M

Affiliations

PMID: 21660186DOI: 10.2174/1874357901105010022

Abstract
During the spring of 2009, a new influenza A (H1N1) virus of swine origin emerged and spread worldwide causing a pandemic influenza. Here, 329 naso-pharyngeal swabs collected from patients with flu-like symptoms were analyzed by real-time PCR for the presence of H1N1 2009 pandemic virus. Twenty-five samples collected from immunocompetent and immunodepressed patients contained the H1N1 pandemic virus. Phylogenetic analysis of the hemagglutinin and neuraminidase genes showed no obvious differences in terms of similarity and/or homology between the sequences identified in immunocompetent individuals and those obtained from immunocompromised patients. Pre-existing clinical conditions may influence the outcome of H1N1 disease.

Keywords: H1N1 pandemic virus; influenza surface antigens.; phylogenetic analysis; respiratory infections; swine flu

More resources
EndNote: Download