Codeplot
hal_append_subtree
Introduction

Append a cactus databse to a hal database

Script
Input
Task nameAttribute nameTypeDescription
* cactus_step4.hal_append_subtree rootNameString name of subtree root
* cactus_step4.hal_append_subtree parentNameString node to be added to
* cactus_step4.hal_append_subtree in_hal_parentFile destination tree
* cactus_step4.hal_append_subtree in_hal_childFile alignment containing the tree to be appended
Output
Task nameAttribute nameTypeDescription
* cactus_step4 out_halFile output Hierarchical Alignment (HAL) Format file list.return the output file to the column name of the corresponding table by this.xxx
* cactus_step4 out_mafFile output MAF Format file .return the output file to the column name of the corresponding table by this.xxx