Codeplot
Introduction
Script
Input
Output
cactus_preprocess
Introduction

Preprocessing tool for running cactus

Script
Input
Task nameAttribute nameTypeDescription
*
      cactus_step1
    namesArray[String]
      Space-separated list of output fasta names (one for each in_files)
    
*
      cactus_step1
    filesArray[File]
      Space-separated list of input fasta paths
    
*
      cactus_step1
    memoryString
      Number of memory running tasksnotice:1. The value range is 0.25-32 cores, in addition, 48 cores and 64 cores can be selected, and the CPU must be an integer multiple of 0.25 cores; 2. The memory value range is 1GB-512GB, and the memory must be an integer multiple of 1GB. 3. The CPU / memory ratio must be between 1:2 and 1:8
    
*
      cactus_step1
    cpuString
      Number of CPU running tasks.notice:1. The value range is 0.25-32 cores, in addition, 48 cores and 64 cores can be selected, and the CPU must be an integer multiple of 0.25 cores; 2. The memory value range is 1GB-512GB, and the memory must be an integer multiple of 1GB. 3. The CPU / memory ratio must be between 1:2 and 1:8
    
*
      cactus_step1
    config_fileFile
      Specify cactus configuration file
    
Output
Task nameAttribute nameTypeDescription
*
      cactus_step1
    out_halArray[File]
      output Hierarchical Alignment (HAL) Format file list.return the output file to the column name of the corresponding table by this.xxx