Description: Whole genome sequencing and de novo assembly of the Australian rainforest tree, Rhodamnia argentea, using 10x Chromium linked reads. Supernova v2 assembly of the data generated a 415 Mb draft genome (6.28% gaps) with a maximum scaffold size of 7.63 Mb, primary scaffold N50 of 857 kb (L50=122) and a primary scaffold BUSCO (v2.0.1 short) completeness estimate of 91.8% (6.1% missing). Pseudodiploid processing of the assembly generated non-redundant alternative scaffolds for 255 Mb (61.5%) of the assembly, with an N50 of 1.43 Mb (L50=52, 6.49% gaps, 86.3% BUSCO complete; 11.6% BUSCO missing).

Data type: Genome sequencing and assembly

Sample scope: Monoisolate

Last updated: 2019-01-03