Single cell RNA-seq analysis of endothelial cells during diabetic atherosclerosis
Source: NCBI BioProject (ID PRJNA716324)

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Project name: Single cell RNA-seq analysis of endothelial cells during diabetic atherosclerosis
Description: Single-cell RNA sequencing (scRNA-seq) was performed on the CD31-mircrobeads enriched endothelial cells isolated from aorta and heart from eight-week-old, male Ldlr-/- mice fed standard chow (Chow) or diabetogenic high-fat diet with 0.15% cholesterol (DDC) diet for 12 weeks. This study report the changes of EC subpopulations, fractions, transcriptomic and metabolic profiles during diabetic atherosclerosis.Overall design: Examination of the transcriptomic profiles of endothelial cells isolated from aorta and heart pooled from three Ldlr-/- mice fedstandard chow (Chow) or diabetogenic high-fat diet with 0.15% cholesterol (DDC) diet for 12 weeks
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: ModelOrganism
Organization: Eugene Chen's lab, Cardiovascular Center, University of Michigan
Literatures
  1. PMID: 34095155
Last updated: 2021-03-22
Statistics: 2 samples; 2 experiments; 2 runs