A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
Source: NCBI BioProject (ID PRJNA566089)
Source: NCBI BioProject (ID PRJNA566089)
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Project name: A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
Description: We measured the transcriptional changes of dark grown seedlings in which CHA19, ENAP1, LBD16 and WRI3 translocation into the nucleus are controlled by a dexamethasone-inducible glucocorticoid receptor to investigate targets of these TFs in the TCA cycle and other sectors of primary metabolism.Overall design: 35S:CHA19, 35S:GR-ENAP1, 35S:GR-LBD16 and 35S:GR-WRI3 were grown in half-strength MS media for 5 days in the dark and then transferred to media with mock or 10 uM dexamethasone to be treated for 24 hr. mRNA was extracted from whole seedlings for RNA-seq libraries.
Data type: Transcriptome or Gene expression
Sample scope: Multiisolate
Relevance: ModelOrganism
Organization: Kliebenstein, Plant Sciences, UC Davis
Literatures
- PMID: 34816587
Last updated: 2019-09-18